Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28e05
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.36 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.5  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   3.3  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 434 REKFGKDSNEDEDKVESVDETY-ENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPN 601
           +E+ G+D ++D+ K+E V E   E+    DK + + I+ K       NK   + + N
Sbjct: 233 KEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKTKPIWTRN 289


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 383 VKENQLPERCSGLVKDIREKFGKDSNE 463
           V  N LPER   +   I  +FG+ +NE
Sbjct: 30  VPNNFLPERYKPIGVQIANRFGEQANE 56


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 551 LEPLMSKNKRNSVASPN 601
           LEPL S N   SVA+PN
Sbjct: 492 LEPLYSGNLAVSVATPN 508


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 70  IFGYARNVYREFLFVLPSTCLHQ 138
           +F YAR +Y    FVL S  LH+
Sbjct: 283 VFWYARLLYATADFVLLSHLLHE 305


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 636 GEPTPIKKTAPDRQRAKTTLGQSY 707
           G PTP+   AP +     ++G +Y
Sbjct: 315 GTPTPMMSPAPPQDSMGYSMGSAY 338


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/17 (41%), Positives = 15/17 (88%)
 Frame = +3

Query: 363 NYYMMSLSKKINYLNVV 413
           +Y++ SLSK ++++NV+
Sbjct: 193 SYHVPSLSKYLDFINVM 209


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 584 YFFYFLTSMVPVSFLFLQVVIY 519
           Y+FY+   +  V  LFL  + Y
Sbjct: 114 YYFYYAFIIFTVHLLFLLCIYY 135



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 584 YFFYFLTSMVPVSFLFLQVVIYQLCM 507
           Y+FY    +  +  LF  V+I  LC+
Sbjct: 213 YYFYSAFIIFTIHLLFYCVLIILLCI 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,442
Number of Sequences: 336
Number of extensions: 3945
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)