Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28e05
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22180-8|CAA80177.2| 107|Caenorhabditis elegans Hypothetical pr... 35 0.068
AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical ... 33 0.21
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 33 0.27
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek (dictyos... 33 0.27
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 33 0.27
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 32 0.36
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 31 0.63
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z74041-2|CAA98521.1| 237|Caenorhabditis elegans Hypothetical pr... 31 0.84
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 31 1.1
CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 31 1.1
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 30 1.5
AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical ... 30 1.5
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 30 1.9
Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 29 2.6
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 29 2.6
Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical pr... 29 4.5
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 29 4.5
L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical pr... 28 5.9
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 28 5.9
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical ... 28 5.9
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 28 7.8
AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine re... 28 7.8
>Z22180-8|CAA80177.2| 107|Caenorhabditis elegans Hypothetical
protein K11H3.5 protein.
Length = 107
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 344 EKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYEN 505
EK KIAK+L + K Q+ E L++ + E D E E+K+E + +Y N
Sbjct: 29 EKHKIAKMLQNEQ-KSLQMLEEEQALLEKVVETLSNDIEEKEEKIEKLRRSYTN 81
>AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical
protein F37E3.1 protein.
Length = 798
Score = 33.1 bits (72), Expect = 0.21
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = +2
Query: 356 IAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLE 535
+ KL + V E + E L + K ++ +E+ D DET E + D LE
Sbjct: 640 LEKLTRQINVVEKDIKE----LTEKTENKIKEEDDEESDIKMDEDETKEEKFKQDLEDLE 695
Query: 536 EIERKLEPLMSKNKRNSVASPNLIGHESDPKRPWRTNSNKENCSGST 676
+ KLE +++ K + + LI + K +N+++ + SG T
Sbjct: 696 NNKEKLERMVTFQK--GLFNDFLIAFIEEIKNAATSNTSEMDGSGDT 740
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 422 VKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPN 601
++++ + +D + + +K E ++E E+ D L+ E + +KN+RN +
Sbjct: 262 IENLEDLNNEDEDSENEKEEEIEENEEDYDQSDIEMLDSDEEEAGEEAAKNRRNLLL--G 319
Query: 602 LIGHESDPKRP 634
LIG + D RP
Sbjct: 320 LIGVQEDKNRP 330
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/100 (23%), Positives = 48/100 (48%)
Frame = +2
Query: 383 VKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPL 562
VK+N+ ER K+ ++ K+ ++++K + D+ E K +++E E+K+ L
Sbjct: 359 VKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEKEKDKEKEREKRKSKEKIKEKEKKMGSL 418
Query: 563 MSKNKRNSVASPNLIGHESDPKRPWRTNSNKENCSGSTTS 682
+R S A ++ PK+ +++ S+TS
Sbjct: 419 EKTTERTSEAPSTNALPKAKPKKIRTLPPKQKHTKTSSTS 458
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 422 VKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPN 601
++++ + +D + + +K E ++E E+ D L+ E + +KN+RN +
Sbjct: 262 IENLEDLNNEDEDSENEKEEEIEENEEDYDQSDIEMLDSDEEEAGEEAAKNRRNLLL--G 319
Query: 602 LIGHESDPKRP 634
LIG + D RP
Sbjct: 320 LIGVQEDKNRP 330
>AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform c protein.
Length = 536
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +2
Query: 314 EQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDE 493
E +M D+EK +++ K+ + +D+ K +E E +VESVD
Sbjct: 29 ESLKRMEVDDEKEPEEEIVEKTEEKQEE---------EDVTVKL---EDETETEVESVDG 76
Query: 494 TYENPYIVDKSQL--EEIERKLEPLMSKNKRNSVASPNLIGHESDP 625
E +VD+ Q+ E + K E L K + + P + DP
Sbjct: 77 GQEEKEVVDEKQVDAERVNTKTEELSPKKEVKAEEDPETETKKKDP 122
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +2
Query: 314 EQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDE 493
E +M D+EK +++ K+ + +D+ K +E E +VESVD
Sbjct: 29 ESLKRMEVDDEKEPEEEIVEKTEEKQEE---------EDVTVKL---EDETETEVESVDG 76
Query: 494 TYENPYIVDKSQL--EEIERKLEPLMSKNKRNSVASPNLIGHESDP 625
E +VD+ Q+ E + K E L K + + P + DP
Sbjct: 77 GQEEKEVVDEKQVDAERVNTKTEELSPKKEVKAEEDPETETKKKDP 122
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +2
Query: 296 TKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPER---CSGLVKDIREKFGKDSNED 466
T +II++ +K + DE K + K ++ + E +L ++ + VK++++ + E
Sbjct: 1067 TAKEIIQKQAKKI-DELKEECRKRKNEASRLERKLEDKEAMMADCVKELKDSHKERLKEM 1125
Query: 467 EDKVESV---DETYENPYIVDKSQLEEIERK 550
E KVE V + EN KSQ+E +R+
Sbjct: 1126 EQKVEDVKRKNSKLENENSTQKSQIETFQRE 1156
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 31.5 bits (68), Expect = 0.63
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 332 MTDEEKSKIAKLLHDVAVKENQL-PERCSGLVKDIREKFGKDSNEDEDKVESVDETYENP 508
+T E+K K + +N+L PE ++ D EKF +D + +DK E+ +E
Sbjct: 516 VTAEDKGTGNKNKITITNDQNRLSPEDIEAMINDA-EKFAEDDKKVKDKAEARNELESYA 574
Query: 509 YIVDKSQLEEIER 547
Y + K+Q+E+ E+
Sbjct: 575 YNL-KNQIEDKEK 586
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 31.1 bits (67), Expect = 0.84
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +2
Query: 293 NTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDED 472
N +I + + +E K+ +AKL + K N+ E+ V+ R K + ED
Sbjct: 69 NAAEEIHRKSVEKFNEEHKTYMAKLEKQLE-KINEKGEQDVKEVEQQRVKLEEQRTEDLV 127
Query: 473 KV-ESVDETYENPYI-VDKSQLEEIERKLEPLMSKNKRNS 586
K ES+ E Y ++K ++E+ K+E L +K+K+N+
Sbjct: 128 KHHESMANLSEKKYKEIEKQRVEQHMLKMEELNAKSKQNT 167
>Z74041-2|CAA98521.1| 237|Caenorhabditis elegans Hypothetical
protein T03F7.6 protein.
Length = 237
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +1
Query: 40 IILFLVTVCCIFGYARNVYREFLFVLPSTCLHQNEFISWCFKFIKPTTKPN*KIAKI 210
I LFL C IFG +Y FVL +T L+ + + F+ +TK KIAKI
Sbjct: 140 ISLFLSFWCLIFGIIPFIYLSEYFVLANTTLNLTATV-FPILFLAGSTKIRKKIAKI 195
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 332 MTDEEKSKIAKLLHDVAVKENQL-PERCSGLVKDIREKFGKDSNEDEDKVESVDETYENP 508
+T E+K K + +N+L PE ++ D EKF +D + +DK E+ +E
Sbjct: 516 VTAEDKGTGNKNKITITNDQNRLSPEDIERMINDA-EKFAEDDKKVKDKAEARNELESYA 574
Query: 509 YIVDKSQLEEIER 547
Y + K+Q+E+ E+
Sbjct: 575 YNL-KNQIEDKEK 586
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Frame = +2
Query: 314 EQFSKMMTDEEK-SKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 490
E +M+ D EK ++ K + D A N+L L I +K DED ++++
Sbjct: 541 EDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIE 600
Query: 491 ETYEN--PYIVD---------KSQLEEIERKLEPLMSK 571
E E ++ K Q +++E K++P++SK
Sbjct: 601 EAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSK 638
>CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/105 (24%), Positives = 51/105 (48%)
Frame = +2
Query: 194 KKLQKSSFRPH*IDLTMGASMPMVTKATVYFINNTKPDIIEQFSKMMTDEEKSKIAKLLH 373
+K +K+ +D+ M + K + F N + EQ +K T +K K+AK
Sbjct: 23 EKAKKAIVEIERLDILAKKEMEVAKKHKIEFFANYEEMTAEQKTKAFTFMQK-KMAK--- 78
Query: 374 DVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENP 508
V+ +Q E SGL +++ +GK E++ +E++++ + P
Sbjct: 79 -VSEYSDQKIEIASGLKVLLKDVYGKFMEEEQKFIENLNKIPKAP 122
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +2
Query: 293 NTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVK---ENQLPERCSGLVKDIREKFGKDSNE 463
NTK D+ F K T +E K + D + E + ER + +D+R K K +
Sbjct: 50 NTKNDL--GFCKYTTHDENLKNSYKNSDKKWRMGFEKRFLERIRRIHEDVRRKIQKHEDR 107
Query: 464 ---DEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 571
+ + +S +ET+ + + + E++ +K+E LM +
Sbjct: 108 LAVTQGESKSAEETFGQKILEIEQRREQLTKKMEDLMDE 146
>AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical
protein Y119D3B.12b protein.
Length = 224
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +2
Query: 293 NTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVK---ENQLPERCSGLVKDIREKFGKDSNE 463
NTK D+ F K T +E K + D + E + ER + +D+R K K +
Sbjct: 50 NTKNDL--GFCKYTTHDENLKNSYKNSDKKWRMGFEKRFLERIRRIHEDVRRKIQKHEDR 107
Query: 464 ---DEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 571
+ + +S +ET+ + + + E++ +K+E LM +
Sbjct: 108 LAVTQGESKSAEETFGQKILEIEQRREQLTKKMEDLMDE 146
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +2
Query: 452 DSNEDEDKVESVDETYENPYIV---DKSQLEEIERKLEPLMSKNKRNSVASPNLIGHESD 622
D N+++ + +E Y+N IV ++ +L+ +E KLE + + ++ D
Sbjct: 617 DDNDEDGECIDEEEDYDNTEIVYESEEDELDGLEAKLERESDRRHKKWEKKNKVMIDSDD 676
Query: 623 PKRPWRTNSNKENCSGSTTS*NDTWTKL 706
+ + +KEN T D W KL
Sbjct: 677 EEEEEENDDDKENQDDDTHDIVD-WDKL 703
>Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical
protein T04F8.6 protein.
Length = 766
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/62 (24%), Positives = 36/62 (58%)
Frame = +2
Query: 395 QLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKN 574
++ ERC G + + EKF + +E + ++E++++ +V +++ ++ KL+ + N
Sbjct: 313 EMEERCRGRIAAMEEKFRMERHEMQKEIENIEKDLS---LVRQNE-TSLKNKLQLVERHN 368
Query: 575 KR 580
KR
Sbjct: 369 KR 370
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +2
Query: 455 SNEDEDKVESVDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLIGHESDPKRP 634
S + +++V T+ENPY+ SQ +++ + L + + + +L H+ P P
Sbjct: 32 SKQSSINLQTVVVTHENPYVTMTSQSSKMDIPV-ILPKRFNMSDIEHKHLPPHQPPPPVP 90
Query: 635 WR-----TNSNKENCSGSTTS*NDTWT 700
T++N S +T+S N T T
Sbjct: 91 HHHQNQPTHNNTTTISSATSSINTTTT 117
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 29.5 bits (63), Expect = 2.6
Identities = 33/119 (27%), Positives = 57/119 (47%)
Frame = +2
Query: 305 DIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVES 484
+II+ F++ + E K +L+ +A E QL + +K +R KD N+ + ++
Sbjct: 270 EIIDLFNQFKSSMESQK--DILNTLAGLEEQLGDHQLE-IKSVR----KDINKLKG-LQG 321
Query: 485 VDETYENPYIVDKSQLEEIERKLEPLMSKNKRNSVASPNLIGHESDPKRPWRTNSNKEN 661
Y+ + KS LEEI+RK++ ++ NS+ D RP NS KE+
Sbjct: 322 KQSFYKEELKLKKSALEEIQRKID--YDQDVLNSLKVVEKAAKPDDYLRP--RNSRKES 376
>Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical
protein C17H1.5 protein.
Length = 351
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/79 (22%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 389 ENQLPERCSGLVKDIREKFGKDSNEDEDKVESVDETYENPYIVDKSQLEEI--ERKLEPL 562
E Q+ E +D+R+ + +N ++ + E++D E +++ + EEI +RK + +
Sbjct: 94 ETQIKEIKEKGEEDVRKVELQRANLEKQRTEALDIHLETMKELNEKKFEEIRQQRKEQNI 153
Query: 563 MSKNKRNSVASPNLIGHES 619
++ + ++++ N I HE+
Sbjct: 154 LNVEEMKALSTRNAIEHET 172
>Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical
protein F59D12.3 protein.
Length = 356
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 431 IREKFGKDSNEDEDKVESVDETYENPYIVDKSQ 529
IREK GK+ D + + + YEN Y + K Q
Sbjct: 318 IREKIGKEMRSDPEAMRLLHLIYENDYRIFKLQ 350
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 6/118 (5%)
Frame = +2
Query: 299 KPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGK--DS-NEDE 469
KP+++E+ + +E+K K+ + + KE + + DS EDE
Sbjct: 49 KPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLDFSSSDKSSLSSRPDSPEEDE 108
Query: 470 DKVESVDETYENPYIVDKSQLEEIERKL---EPLMSKNKRNSVASPNLIGHESDPKRP 634
D V V+ T +P SQ + L E L+ + ++ A+P H+ P
Sbjct: 109 DAVPVVNRTTTSPPTSPPSQTAVEQDSLQAEEMLVDMSLDDAPAAPPRKPHQRSAPPP 166
>L10986-6|AAA28015.1| 262|Caenorhabditis elegans Hypothetical
protein F10E9.4 protein.
Length = 262
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 347 KSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVE 481
K + K++ +KE + E + D++EK ++ +EDED E
Sbjct: 218 KGEYVKMIEKAEIKEEEEVEDEADEETDVKEKVKEEEDEDEDMEE 262
>Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical
protein F33A8.10 protein.
Length = 263
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = +2
Query: 311 IEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNEDEDKVESVD 490
IE+F K M+DE +S DV K+ L ++ + + + + K++ E+ +V +
Sbjct: 170 IEEFMKTMSDERQSMYTNYRRDVIDKD--LEDKRRNVDRAV-SQMSKEAVEEFQRVVRIM 226
Query: 491 ETYENPYIVDKSQLEEIERKLEPLMSK 571
P ++EEI KL + K
Sbjct: 227 HDPSQPEKEKLKKIEEIYSKLPDSIRK 253
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 28.3 bits (60), Expect = 5.9
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +2
Query: 245 GASMPMVTKATVYFINNTKPDIIEQFSKMMT--DEEKSKIAKLLHDVAVKENQLPERCSG 418
GA + V +A+ + + +I+E+ K+ +E K K K K+++ E
Sbjct: 36 GAELDRVKRASDHKLEKKLDEIMEKVEKIKDKIEENKEKREKKNKKKGNKKDEDEEEEED 95
Query: 419 LVKDIREKF-GKDSNEDEDKVESVDETYENPYIVDKSQLEEIERK 550
K ++K KDS E+EDK + D+ +N D+S+ E +RK
Sbjct: 96 KDKKKKDKKKNKDSEEEEDKKK--DKKKKND-SSDESEEENKKRK 137
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 28.3 bits (60), Expect = 5.9
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 9/121 (7%)
Frame = +2
Query: 299 KPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFG-----KDS-N 460
KP+++E+ + +E+K K+ + + KE + + KDS
Sbjct: 49 KPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLDFSSSDKSSLSSRPNVKDSPE 108
Query: 461 EDEDKVESVDETYENPYIVDKSQLEEIERKL---EPLMSKNKRNSVASPNLIGHESDPKR 631
EDED V V+ T +P SQ + L E L+ + ++ A+P H+
Sbjct: 109 EDEDAVPVVNRTTTSPPTSPPSQTAVEQDSLQAEEMLVDMSLDDAPAAPPRKPHQRSAPP 168
Query: 632 P 634
P
Sbjct: 169 P 169
>AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical
protein F58D5.6 protein.
Length = 787
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +2
Query: 134 TKMNSLVGASNL*NQPPNQIKKLQKSSFRPH*IDLTMGASMPMVTKATVYFINNTKPDII 313
+K+N L P ++KL+ +P L++ S+ +++ ++
Sbjct: 306 SKLNKYYEPEKLFTSLPKCVEKLKALKTQPDFDKLSIIDSVVNTFHENARELHDKMSNVH 365
Query: 314 EQFSKMMTDEEKSKIAKLL 370
+FSK+ TDEE KI +L
Sbjct: 366 GEFSKVYTDEEAKKIHNIL 384
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/95 (18%), Positives = 45/95 (47%)
Frame = +2
Query: 287 INNTKPDIIEQFSKMMTDEEKSKIAKLLHDVAVKENQLPERCSGLVKDIREKFGKDSNED 466
+ + DI++++ + + AKL+ D + E + + ++ ++ KDS E
Sbjct: 19 LTSISQDIVDKYGNLKVSLNVNATAKLIFDRLENLEDIAEMSTRNLSNLIDQTAKDSPEM 78
Query: 467 EDKVESVDETYENPYIVDKSQLEEIERKLEPLMSK 571
+++S ++ EN + ++ +E +L + SK
Sbjct: 79 LAEIKSQAQSCEN-LVEFLQSMKNVEEQLIIMRSK 112
>AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine
receptor, class i protein54 protein.
Length = 335
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -2
Query: 366 SFAIFDFSSSVIIFENCSMMSGFVLFIKYTVALVTI 259
+F+I++FSS + S++ GF+ F + + LV I
Sbjct: 181 NFSIYEFSSKFLALIIFSILGGFLSFTVFILVLVNI 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,415,783
Number of Sequences: 27780
Number of extensions: 359024
Number of successful extensions: 1402
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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