Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28e01
         (670 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54QL1 Cluster: Putative uncharacterized protein; n=2; ...    37   0.38 
UniRef50_Q9TM12 Cluster: Putative uncharacterized protein menC; ...    36   0.88 
UniRef50_UPI000155590D Cluster: PREDICTED: similar to cell surfa...    35   1.5  
UniRef50_Q58E07 Cluster: LOC733183 protein; n=2; Xenopus|Rep: LO...    34   3.6  
UniRef50_Q9VEA0 Cluster: CG7142-PA; n=2; Sophophora|Rep: CG7142-...    33   4.7  
UniRef50_UPI000051AB9B Cluster: PREDICTED: similar to WD repeat,...    33   8.2  
UniRef50_Q6IE07 Cluster: Trypsin X5 precursor; n=8; Eutheria|Rep...    33   8.2  

>UniRef50_Q54QL1 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1141

 Score = 37.1 bits (82), Expect = 0.38
 Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
 Frame = -3

Query: 587 IVQNSEIIVSMQPKIMSFGGLNFTKAKT*LLKESSAYSPSNFLSFPKISDIVSGVDLA*E 408
           I++  +  + +  ++MSF GLN ++    L+  +  +S  +FL+     D ++ +D    
Sbjct: 197 ILEKKKKRILVTEQLMSFNGLNCSRMTITLINATEQHSGLDFLNTINSIDELN-LDFGDN 255

Query: 407 MLSLPD*IIPNS*NELSV*LYS----KKRIVGLVFFEGFQVHSIPGGNVL 270
           +++ P  II ++ N+L     S    K  I+GL   EG Q  SI GG  L
Sbjct: 256 LIAFPG-IIGSNNNKLKTLSISGKFKKPSIIGLTIQEGLQEFSINGGGEL 304


>UniRef50_Q9TM12 Cluster: Putative uncharacterized protein menC;
           n=1; Cyanidium caldarium|Rep: Putative uncharacterized
           protein menC - Cyanidium caldarium
          Length = 364

 Score = 35.9 bits (79), Expect = 0.88
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -3

Query: 206 LKVVDVFTCSFTFLLAHAKKCCTKKVRLVTN 114
           L  +DVF  +FTFL+ +   CC+KK+RL TN
Sbjct: 168 LTFIDVFI-NFTFLVKYRNLCCSKKIRLDTN 197


>UniRef50_UPI000155590D Cluster: PREDICTED: similar to cell surface
           glycoprotein OX2 receptor, partial; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to cell surface
           glycoprotein OX2 receptor, partial - Ornithorhynchus
           anatinus
          Length = 541

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +1

Query: 280 PPGIECTWKPSKKTRPTMRFFEYNQTESSFYELGIIQS-GKLNISQAKS--TPDTISDIL 450
           PP +   W P     P ++      T+ +FY   I  S G  N     S   P T+S ++
Sbjct: 209 PPDVRLAWGPRPDLNPALQIEPVTITDDNFYRCDIATSQGNFNCGLCLSVLVPPTVSLVV 268

Query: 451 GKDKK 465
           GKD +
Sbjct: 269 GKDNQ 273


>UniRef50_Q58E07 Cluster: LOC733183 protein; n=2; Xenopus|Rep:
           LOC733183 protein - Xenopus laevis (African clawed frog)
          Length = 290

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +1

Query: 553 CILTIISEFWTITAASCIDAIEELDSLDSF-VMLEDYGLE 669
           C  ++ISE W +T ASC+D+  E    DSF V+L DY L+
Sbjct: 63  CGGSLISEKWVVTTASCVDSETE----DSFIVVLGDYDLD 98


>UniRef50_Q9VEA0 Cluster: CG7142-PA; n=2; Sophophora|Rep: CG7142-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 334

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +1

Query: 502 HVLALVKFKPPKDIIFGCILTIISEFWTITAASCIDAIEELDS 630
           +V+++    P + ++  C  TII+E W +TAA C+ + + +++
Sbjct: 93  YVVSIQMMTPDQGLVHYCAGTIINEHWILTAAHCLSSPQAVEN 135


>UniRef50_UPI000051AB9B Cluster: PREDICTED: similar to WD repeat,
           SAM and U-box domain containing 1; n=1; Apis
           mellifera|Rep: PREDICTED: similar to WD repeat, SAM and
           U-box domain containing 1 - Apis mellifera
          Length = 882

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
 Frame = +1

Query: 364 SFYELGIIQSGKLNISQAKSTPDTISDILGKDKKFDGEYAEDSFNNHV--LALVKFKPPK 537
           S  +L  I  GK N++   S   T  DI  K+KK        +F  H   +  V+F P  
Sbjct: 617 SMVKLWQITIGKRNVTATGSIGGTGDDIQYKEKK--------TFTGHGGNVTCVRFSPIH 668

Query: 538 DIIFGCILTI-ISEFWTITAASCIDAIEELDSL 633
             I G + T   +  W+I +  C+  +EE +SL
Sbjct: 669 SEILGSVATDRTARIWSIYSGVCLYVLEEHESL 701


>UniRef50_Q6IE07 Cluster: Trypsin X5 precursor; n=8; Eutheria|Rep:
           Trypsin X5 precursor - Rattus norvegicus (Rat)
          Length = 250

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 22/66 (33%), Positives = 33/66 (50%)
 Frame = +1

Query: 406 ISQAKSTPDTISDILGKDKKFDGEYAEDSFNNHVLALVKFKPPKDIIFGCILTIISEFWT 585
           +S A S P+ +   L  D+  D EY  ++FN   +A +K  P       C+ T+I   W 
Sbjct: 10  LSLAASYPEVV---LKGDQDSD-EYLPENFNVPYMAYLKSSPEP-----CVGTLIDPLWV 60

Query: 586 ITAASC 603
           +TAA C
Sbjct: 61  LTAAHC 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,767,026
Number of Sequences: 1657284
Number of extensions: 13436768
Number of successful extensions: 33070
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33065
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)