Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28e01
         (670 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039034-1|AAB94161.2|  423|Caenorhabditis elegans Hypothetical ...    30   1.7  
Z81027-2|CAB02687.1|  282|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z82270-3|CAB63205.1|  667|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AL032632-2|CAA21590.1|  161|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    28   5.2  
Z83110-1|CAB05523.2|  300|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    27   9.1  
AL031627-18|CAA20951.1|  347|Caenorhabditis elegans Hypothetical...    27   9.1  

>AF039034-1|AAB94161.2|  423|Caenorhabditis elegans Hypothetical
           protein H22D07.1 protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -3

Query: 350 LYSKKRIVGLVFFEGFQVHSIPGGNVLCVVCL*YFVWSGIMAGTVVSCLKVVDVF-TCSF 174
           LY  K+I+ L+ ++ +      GG  LC  C  +  +S  +   V++C+ +  VF   + 
Sbjct: 87  LYVPKQIIWLITYQWY------GGEFLCRACAFFSTFSFYLNSFVIACIAIDRVFGAYNI 140

Query: 173 TFLLAHAK 150
           + L AH K
Sbjct: 141 SSLNAHRK 148


>Z81027-2|CAB02687.1|  282|Caenorhabditis elegans Hypothetical
           protein AH10.3 protein.
          Length = 282

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -3

Query: 347 YSKKRIVGLVFFEGF-QVHSIPGGNVLCVVCL 255
           +SKK ++ L+FFE F ++ + P G +LC  C+
Sbjct: 122 WSKKCLLELIFFENFARLSNFPIGYILCQHCV 153


>Z82270-3|CAB63205.1|  667|Caenorhabditis elegans Hypothetical
           protein F53H2.3 protein.
          Length = 667

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 280 PPGIECTWKPSKKTRPTMRFFEYNQTESSFYELGIIQSGK 399
           P G      P ++ +PTMR+++ N ++  FYE+  +   K
Sbjct: 368 PQGAHAPPPPQQQQQPTMRYYDAN-SDGFFYEMASVDGWK 406


>AL032632-2|CAA21590.1|  161|Caenorhabditis elegans Hypothetical
           protein Y11D7A.5 protein.
          Length = 161

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = -3

Query: 176 FTFLLAHAKKCCTKKVRLVTNIIKNTASNNERQISGFVNDLHHLLSSLKQKTH 18
           F +LL  AK     K+  V N  K TA+NN + +SG   +L +   S K   H
Sbjct: 106 FGYLLVSAK---LTKMNEVLNTKKITAANNSKMLSGIYTELKNWELSSKAPCH 155


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
            protein 2 protein.
          Length = 1080

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = -3

Query: 242  WSGIMAGTVVSCLKVVDVFTCSFTFLLAHAKKCCTKKVRLVTNIIKNTASNNERQ 78
            WS       + CL++++   C F  LL+  K    +K++ V +     A  NE +
Sbjct: 862  WSEWDTNRKLECLRLLNEIVCEFDKLLSKPKFSSVEKIKTVGSTYMAAAGLNESE 916


>Z83110-1|CAB05523.2|  300|Caenorhabditis elegans Hypothetical
           protein F57C2.1 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
 Frame = +1

Query: 286 GIECTWKPSKKTRPTMRFFEYNQTESSFYELGIIQ-SGKLNISQAKSTPDTISDILGK-- 456
           G++C WK    +     FF +    +    LGI   +G + +  A  +P  +   L K  
Sbjct: 32  GLKCVWKTRYASIAEQAFFSWEFDWNELKRLGIDSLAGNITVKSASMSPLNVQIDLRKPT 91

Query: 457 ---DKKF---DGEYAEDSFNNHVLALVKFKP 531
              ++ F   D +YA +S+ N       F P
Sbjct: 92  EIVERAFYLRDDDYAYNSYINKTTFEYSFVP 122


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 553 CILTIISEFWTITAASC 603
           C  T+I +FW +TAA C
Sbjct: 66  CGATVIDDFWLVTAAHC 82


>AL031627-18|CAA20951.1|  347|Caenorhabditis elegans Hypothetical
           protein Y102A5C.29 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +1

Query: 40  LKRWCKSFTKPEICLSLLEAVFLIILVTSLT-FLVQHFLACASRNVNEHVNTSTTFRHET 216
           L+   ++    ++ L++   +  ++L  S+T F+ +H    A+  +NE+ N+ST + H+T
Sbjct: 81  LREGFRTIMSNQMALTIWIFLLCLVLPASITCFIYRHN---AASQINENSNSSTKYSHKT 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,870,854
Number of Sequences: 27780
Number of extensions: 346679
Number of successful extensions: 950
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)