Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28d24
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.57 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.1  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.3  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
 Frame = +2

Query: 155 NKMACCCKPGKSNKSSTSCLGRCDLPKHRCLERREVKPGPV--PKHMGWLYTAKNSPEHQ 328
           N   C CKPG +  +  + +  CD     CL     +        H  + YT K+  E+ 
Sbjct: 43  NSYICTCKPGFTGSNCQNRINLCD--SSPCLNGATCQDHTTHYTCHCPYGYTGKDCGEYV 100

Query: 329 LRCGWRPGHVSCSVLRKIEQHNSM 400
             C   P     + ++   Q+  +
Sbjct: 101 DWCSTNPCENQATCVQNKNQYQCL 124


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 10/42 (23%)
 Frame = -2

Query: 613 RRSVVDIGRFCTY----------CILSFVPYYSKDRLCSRRL 518
           ++S+VD+G F  Y          CI  F P Y  ++  +RRL
Sbjct: 207 KQSIVDMGEFLLYRLLRCWLISKCIYVFNPRYYLEKKVTRRL 248


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 10/42 (23%)
 Frame = -2

Query: 613 RRSVVDIGRFCTY----------CILSFVPYYSKDRLCSRRL 518
           ++S+VD+G F  Y          CI  F P Y  ++  +RRL
Sbjct: 207 KQSIVDMGEFLLYRLLRCWLISKCIYVFNPRYYLEKKVTRRL 248


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 204 VDDLFDFPGLQQHAILLG*M 145
           +DD +D PG+ ++  ++  M
Sbjct: 183 IDDAYDIPGMSENVDVINLM 202


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 492 HRARHFGGMQHGFEHKGREQLE 427
           H      G QH F H+ + QLE
Sbjct: 118 HHEEVADGHQHHFLHENKYQLE 139


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 492 HRARHFGGMQHGFEHKGREQLE 427
           H      G QH F H+ + QLE
Sbjct: 118 HHEEVADGHQHHFLHENKYQLE 139


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 492 HRARHFGGMQHGFEHKGREQLE 427
           H      G QH F H+ + QLE
Sbjct: 118 HHEEVADGHQHHFLHENKYQLE 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,356
Number of Sequences: 336
Number of extensions: 4086
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)