Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28d21
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   3.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   4.1  
AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.    23   7.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   9.6  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 456 RIPHFTVPMFLTTFPETEVNVFIAVITPTDTFWFS 352
           +IP+ T P+   T+   +  +FIA  T     W S
Sbjct: 309 KIPNSTYPVSALTWGHNDKRIFIATGTQVHIAWVS 343


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 499 LSGLYSNTRCKRCCQNTTFYRTHVFDHF 416
           LSG  +  RCK C +  T  R H   HF
Sbjct: 493 LSGGCNLHRCKLCGKVVTHIRNHYHVHF 520


>AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.
          Length = 140

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 448 WYSDNTFYTGYWNKDQREGLGMFVEVNGNWYEGHWEKNL 564
           W S  +    + N D     G+F   N  W + H+  NL
Sbjct: 51  WESSYSTTATHKNTDGSTDYGIFQINNAYWCDSHYGSNL 89


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 406 RSKRLHCRNNANRHLLVFREPIRH 335
           R++R  CR  A R+      P+RH
Sbjct: 500 RARRRRCRPRARRNPPATTRPVRH 523


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,543
Number of Sequences: 2352
Number of extensions: 18092
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)