Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d21
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75550-5|CAA99924.2| 747|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AB069909-1|BAB62876.1| 747|Caenorhabditis elegans junctophilin ... 69 4e-12
Z82262-1|CAB05151.2| 361|Caenorhabditis elegans Hypothetical pr... 31 0.83
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 30 1.5
AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical ... 30 1.5
Z93377-2|CAB07575.2| 326|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z75711-4|CAB00030.1| 134|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL117207-16|CAH60778.1| 402|Caenorhabditis elegans Hypothetical... 30 1.9
AF099917-9|AAC68787.1| 445|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z75550-5|CAA99924.2| 747|Caenorhabditis elegans Hypothetical
protein T22C1.7 protein.
Length = 747
Score = 68.5 bits (160), Expect = 4e-12
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +1
Query: 175 KYVGDWKNDLKDGKGAFVTVSGKLYEGDWYKGFRHGFGVLSNKLPDNTYKLEYRGEWVRG 354
+Y G W + G + SG Y+G W G RHG G+ + + Y+GEW +G
Sbjct: 37 EYAGAWHYGF-EVSGVYTWPSGNTYQGQWQNGKRHGLGI------EQRGRWLYKGEWTQG 89
Query: 355 KPEGVGWRYYGNEDV-YFGFWKSGQKHGYGKMWYSDNTFYTGYWNKDQREGLGM 513
G R N Y G W +G GYG Y D+ Y G W + R G G+
Sbjct: 90 YKGRYGVRQSANSQARYQGTWSAGFHDGYGTEIYVDSGSYQGQWLRGMRHGYGI 143
Score = 64.5 bits (150), Expect = 7e-11
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Frame = +1
Query: 178 YVGDWKNDLKDGKGAFVTVSGK-LYEGDWYKGFRHGFGVLSNKLPDNTYKLEYRGEWVRG 354
YVG W+ G G K Y G W+ GF GV + NTY+ G+W G
Sbjct: 14 YVGGWEEGKAHGHGVCTGPQAKGEYAGAWHYGFEVS-GVYTWP-SGNTYQ----GQWQNG 67
Query: 355 KPEGVGWRYYGNEDVYFGFWKSGQKHGYG-KMWYSDNTFYTGYWNKDQREGLGMFVEVNG 531
K G+G G +Y G W G K YG + + Y G W+ +G G + V+
Sbjct: 68 KRHGLGIEQRGRW-LYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDGYGTEIYVDS 126
Query: 532 NWYEGHWEKNLKSGFG 579
Y+G W + ++ G+G
Sbjct: 127 GSYQGQWLRGMRHGYG 142
Score = 58.8 bits (136), Expect = 4e-09
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +1
Query: 217 GAFVTVSGKLYEGDWYKGFRHGFGVLSNKLPDNTYKLEYRGEWVRGKPEGVGWRYYGNED 396
G F G Y G W +G HG GV + K EY G W G E G + + +
Sbjct: 4 GRFDFDDGGTYVGGWEEGKAHGHGVCTGP----QAKGEYAGAWHYGF-EVSGVYTWPSGN 58
Query: 397 VYFGFWKSGQKHGYGKMWYSDNTFYTGYWNKDQREGLGMFVEVNGN-WYEGHWEKNLKSG 573
Y G W++G++HG G + Y G W + + G+ N Y+G W G
Sbjct: 59 TYQGQWQNGKRHGLG-IEQRGRWLYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDG 117
Query: 574 FGRYYHMHTGQLQEGCWVENI 636
+G ++ +G Q G W+ +
Sbjct: 118 YGTEIYVDSGSYQ-GQWLRGM 137
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 151 AVFTSRFDKYVGDWKNDLKDGKGAFVTVSGKLYEGDWYKGFRHGFGVLSNK 303
AV S + Y+G+WKND++ G G G Y+G+W + G+GV + K
Sbjct: 274 AVEESSIETYMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFK 324
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 469 YTGYWNKDQREGLGMFVEVNGNWYEGHWEKNLKSGFGRYYHMHTGQLQEGCWVENICVKS 648
Y G W D R G G+ +G Y+G W N K G+G G +EG + NI + S
Sbjct: 283 YMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYG-VTTFKDGTKEEGRYKNNILIAS 341
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 175 KYVGDWKNDLKDGKGAFVTVSGKLYEGDWYKGFRHGFGVLSNKLPDNTYKLEYRGE 342
+Y G W DG G + V Y+G W +G RHG+G+ + + K + +
Sbjct: 105 RYQGTWSAGFHDGYGTEIYVDSGSYQGQWLRGMRHGYGIRKSTTYEKAAKFRSKSQ 160
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 394 DVYFGFWKSGQKHGYGKMWYSDNTFYTGYWNKDQREGLGMFVEVNGNWYEGHWEKNL 564
+ Y G WK+ + G+G SD Y G W + + G G+ +G EG ++ N+
Sbjct: 281 ETYMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFKDGTKEEGRYKNNI 337
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +1
Query: 133 KNGVHHAVFTSRFDK--YVGDWKNDLKDGKGAFVTVSGKL-YEGDWYKGFRHGFGVLSNK 303
+NG H + + + Y G+W K G + + + Y+G W GF G+G +
Sbjct: 65 QNGKRHGLGIEQRGRWLYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDGYG--TEI 122
Query: 304 LPDNTYKLEYRGEWVRGKPEGVGWRYYGNEDVYFGFWKSGQKH 432
D+ Y+G+W+RG G G R + F Q H
Sbjct: 123 YVDSG---SYQGQWLRGMRHGYGIRKSTTYEKAAKFRSKSQTH 162
>AB069909-1|BAB62876.1| 747|Caenorhabditis elegans junctophilin
protein.
Length = 747
Score = 68.5 bits (160), Expect = 4e-12
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +1
Query: 175 KYVGDWKNDLKDGKGAFVTVSGKLYEGDWYKGFRHGFGVLSNKLPDNTYKLEYRGEWVRG 354
+Y G W + G + SG Y+G W G RHG G+ + + Y+GEW +G
Sbjct: 37 EYAGAWHYGF-EVSGVYTWPSGNTYQGQWQNGKRHGLGI------EQRGRWLYKGEWTQG 89
Query: 355 KPEGVGWRYYGNEDV-YFGFWKSGQKHGYGKMWYSDNTFYTGYWNKDQREGLGM 513
G R N Y G W +G GYG Y D+ Y G W + R G G+
Sbjct: 90 YKGRYGVRQSANSQARYQGTWSAGFHDGYGTEIYVDSGSYQGQWLRGMRHGYGI 143
Score = 64.5 bits (150), Expect = 7e-11
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Frame = +1
Query: 178 YVGDWKNDLKDGKGAFVTVSGK-LYEGDWYKGFRHGFGVLSNKLPDNTYKLEYRGEWVRG 354
YVG W+ G G K Y G W+ GF GV + NTY+ G+W G
Sbjct: 14 YVGGWEEGKAHGHGVCTGPQAKGEYAGAWHYGFEVS-GVYTWP-SGNTYQ----GQWQNG 67
Query: 355 KPEGVGWRYYGNEDVYFGFWKSGQKHGYG-KMWYSDNTFYTGYWNKDQREGLGMFVEVNG 531
K G+G G +Y G W G K YG + + Y G W+ +G G + V+
Sbjct: 68 KRHGLGIEQRGRW-LYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDGYGTEIYVDS 126
Query: 532 NWYEGHWEKNLKSGFG 579
Y+G W + ++ G+G
Sbjct: 127 GSYQGQWLRGMRHGYG 142
Score = 58.8 bits (136), Expect = 4e-09
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Frame = +1
Query: 217 GAFVTVSGKLYEGDWYKGFRHGFGVLSNKLPDNTYKLEYRGEWVRGKPEGVGWRYYGNED 396
G F G Y G W +G HG GV + K EY G W G E G + + +
Sbjct: 4 GRFDFDDGGTYVGGWEEGKAHGHGVCTGP----QAKGEYAGAWHYGF-EVSGVYTWPSGN 58
Query: 397 VYFGFWKSGQKHGYGKMWYSDNTFYTGYWNKDQREGLGMFVEVNGN-WYEGHWEKNLKSG 573
Y G W++G++HG G + Y G W + + G+ N Y+G W G
Sbjct: 59 TYQGQWQNGKRHGLG-IEQRGRWLYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDG 117
Query: 574 FGRYYHMHTGQLQEGCWVENI 636
+G ++ +G Q G W+ +
Sbjct: 118 YGTEIYVDSGSYQ-GQWLRGM 137
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 151 AVFTSRFDKYVGDWKNDLKDGKGAFVTVSGKLYEGDWYKGFRHGFGVLSNK 303
AV S + Y+G+WKND++ G G G Y+G+W + G+GV + K
Sbjct: 274 AVEESSIETYMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFK 324
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 469 YTGYWNKDQREGLGMFVEVNGNWYEGHWEKNLKSGFGRYYHMHTGQLQEGCWVENICVKS 648
Y G W D R G G+ +G Y+G W N K G+G G +EG + NI + S
Sbjct: 283 YMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYG-VTTFKDGTKEEGRYKNNILIAS 341
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 175 KYVGDWKNDLKDGKGAFVTVSGKLYEGDWYKGFRHGFGVLSNKLPDNTYKLEYRGE 342
+Y G W DG G + V Y+G W +G RHG+G+ + + K + +
Sbjct: 105 RYQGTWSAGFHDGYGTEIYVDSGSYQGQWLRGMRHGYGIRKSTTYEKAAKFRSKSQ 160
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 394 DVYFGFWKSGQKHGYGKMWYSDNTFYTGYWNKDQREGLGMFVEVNGNWYEGHWEKNL 564
+ Y G WK+ + G+G SD Y G W + + G G+ +G EG ++ N+
Sbjct: 281 ETYMGEWKNDMRSGFGVCERSDGLKYQGEWANNAKCGYGVTTFKDGTKEEGRYKNNI 337
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +1
Query: 133 KNGVHHAVFTSRFDK--YVGDWKNDLKDGKGAFVTVSGKL-YEGDWYKGFRHGFGVLSNK 303
+NG H + + + Y G+W K G + + + Y+G W GF G+G +
Sbjct: 65 QNGKRHGLGIEQRGRWLYKGEWTQGYKGRYGVRQSANSQARYQGTWSAGFHDGYG--TEI 122
Query: 304 LPDNTYKLEYRGEWVRGKPEGVGWRYYGNEDVYFGFWKSGQKH 432
D+ Y+G+W+RG G G R + F Q H
Sbjct: 123 YVDSG---SYQGQWLRGMRHGYGIRKSTTYEKAAKFRSKSQTH 162
>Z82262-1|CAB05151.2| 361|Caenorhabditis elegans Hypothetical
protein C43F9.4 protein.
Length = 361
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = -3
Query: 489 FIPIPG---VKGVVRI----PHFTVPMFLTTFPETEVNVFIAVITPTDTFWFSANPFATV 331
F+P+PG VK + R P+F+ + + +A++ TD NPF V
Sbjct: 126 FVPVPGGHFVKSITRTIELDPYFSSGLRFLVLECMSFRMTMALVRTTDVLTSKINPFPRV 185
Query: 330 LQFI 319
+QF+
Sbjct: 186 IQFL 189
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 370 GWRYYGNEDVYFGFWKSGQKHGYGKMWYSDNTFYTGYWNKDQREGLGMFVEVNGN 534
G++ N Y+G+ + Q+ G +Y++N GY+N+ Q++ G N N
Sbjct: 18 GYQQQNNFQQYYGYPQQQQQ---GNQYYNNNNNNNGYYNQQQQQFNGYNNNYNNN 69
>AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical
protein F55A12.6 protein.
Length = 423
Score = 30.3 bits (65), Expect = 1.5
Identities = 47/176 (26%), Positives = 67/176 (38%), Gaps = 10/176 (5%)
Frame = +1
Query: 205 KDGKGAFVTVSGKLYEGDWYKGFRHGFGVLSNKLPDNTYKLE--YRGEWVRGKPEGVGWR 378
+DG + V G+ Y R G V S + N K RG R + GV
Sbjct: 55 EDGNIQYNNVKVTHVRGNGYNANRKGISVSSLQPVSNQSKNRTVVRG---RARAAGVLGL 111
Query: 379 YYGNE------DVYF-GFWKSGQKHGYGKMWYSDNTFYTGYWNKDQREGLGMFVEVNGN- 534
+GN +VY G++ +G +GY Y N + GY N + G + GN
Sbjct: 112 LFGNRQQIGYNNVYGNGYYGNGYNNGYYGNGYYGNGYGNGYGNGYYNQYNGGY---GGNG 168
Query: 535 WYEGHWEKNLKSGFGRYYHMHTGQLQEGCWVENICVKSMMLDIDVRQYCDRPTQYP 702
+Y ++ N G R Y+ + Q Q C V + R YCD P P
Sbjct: 169 YYNQYYNGNNYYGGNRGYYNY-NQGQSYCRVAQFV---DYVGSTPRYYCDCPPYAP 220
>Z93377-2|CAB07575.2| 326|Caenorhabditis elegans Hypothetical
protein F13A7.3 protein.
Length = 326
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 278 TVLVS*VISCLIIPINWSTVANGFAENQKVSVGVITAMKT 397
TV+ S ++C+ I I +S +A +KV GV+T+ KT
Sbjct: 177 TVMTSYFVTCVSIIIMYSQIAVVMVRARKVEQGVLTSTKT 216
>Z75711-4|CAB00030.1| 134|Caenorhabditis elegans Hypothetical
protein K02B12.6 protein.
Length = 134
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = +1
Query: 409 FWKSGQKHGYGKMWYSDNTFYTGYWNKDQREGLGMFVEVNGNWYEGHWEKNLKSGFGRYY 588
++ G Y + + +D T+ + Y+N E G + E N + H+E N + YY
Sbjct: 26 YYPGGHSTSYYQPFQTD-TYGSKYYNT---ESYGKYDEHGNNGKDSHYEPNYYNPIASYY 81
Query: 589 HMHTGQLQEG 618
H + + G
Sbjct: 82 HSYMPKYHGG 91
>AL117207-16|CAH60778.1| 402|Caenorhabditis elegans Hypothetical
protein Y60A3A.24 protein.
Length = 402
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +1
Query: 148 HAVFTSRFDKYVGDWKNDLKDGKGAFVTVSGKLYEGDWYKGFRHGFGVLSNKLPDNTYKL 327
H + +DK + DWKN ++ + VTV G L K F ++ +L K+
Sbjct: 286 HKIAKDEWDKTISDWKNKEEEAEKQGVTV-GTLATRKTKKA--KAFHTINFELCAENVKI 342
Query: 328 EYRGEWVRGKPEGVGWRYYGN--EDVYF 405
E + K + W YG ++V+F
Sbjct: 343 EIKVGREEQKLLNIQWNLYGKCLQNVFF 370
>AF099917-9|AAC68787.1| 445|Caenorhabditis elegans Hypothetical
protein F54D10.9 protein.
Length = 445
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 352 GKPEGVGWRYYGNEDVYFGFWKSGQKHGYGKMWYSDNTFYTGYWNK 489
G E +G YYG + VY ++G G+ WY+ Y+NK
Sbjct: 284 GPDEELG-NYYGLDTVYMYCAETGPAADIGRWWYNKPFNVQTYFNK 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,299,705
Number of Sequences: 27780
Number of extensions: 413505
Number of successful extensions: 1258
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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