Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d18
(785 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 43 6e-05
SPBC1709.12 |rid1||GTPase binding protein Rid1|Schizosaccharomyc... 31 0.14
SPCC191.04c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 29 0.57
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 29 0.57
SPAC14C4.01c ||SPAC19D5.08c|DUF1770 family protein|Schizosacchar... 29 1.00
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 28 1.3
SPBC1703.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 1.3
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 28 1.3
SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces p... 27 2.3
SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|... 27 2.3
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 27 3.0
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 27 3.0
SPCC594.06c |||SNARE Vam7 |Schizosaccharomyces pombe|chr 3|||Manual 27 3.0
SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyc... 27 4.0
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 4.0
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 27 4.0
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 26 5.3
SPAC1782.03 |||microfibrillar-associated protein family protein|... 26 5.3
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 5.3
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 26 5.3
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 5.3
SPAC4F8.02c |mrpl40|SPAC644.02|mitochondrial ribosomal protein s... 26 7.0
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 26 7.0
SPBC4F6.16c |ero11||ER oxidoreductin Ero1a|Schizosaccharomyces p... 26 7.0
SPAC1687.16c |erg3||C-5 sterol desaturase Erg3 |Schizosaccharomy... 25 9.3
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 25 9.3
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 9.3
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/70 (28%), Positives = 42/70 (60%)
Frame = +1
Query: 394 KAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKKNED 573
+ +M ++ N K++ +S ++E E ++++L + + R ++ L+LDL+K +KKNED
Sbjct: 522 RLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKSKKKNED 581
Query: 574 FFSKISKKLE 603
+K+E
Sbjct: 582 LSKLEVEKVE 591
>SPBC1709.12 |rid1||GTPase binding protein Rid1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 367
Score = 31.5 bits (68), Expect = 0.14
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 451 ESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQ-KYQKKNEDFFSKISKK--LECHDTFV 621
E L K + K+++S G + LQ K QKK + + KK E D F+
Sbjct: 52 EDLIKPQVLSSEASKSLLSLNEGIKMEIVSSLQQKDQKKRNKLIAWMRKKPCYEQPDDFI 111
Query: 622 SDIINNKINVEEES 663
S I+N KI+ +ES
Sbjct: 112 SYIVNTKIDSIDES 125
>SPCC191.04c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 100
Score = 29.5 bits (63), Expect = 0.57
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 367 IFCSLQHH*TSPSAFQEFLIFQAYFHIPTYY*FLVPF 257
IF S H + F +F +YFHIP + F+ PF
Sbjct: 7 IFLSCSHR-VIQAKHPPFPLFHSYFHIPDFLSFVFPF 42
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +1
Query: 412 SDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKKNE 570
S ++NLQN++ L+ E+E ++R +++S R + + ++Q+ E
Sbjct: 641 SQLENLQNEERKLQEKVNEHESLLSRTNDILSTLRKERDEKLIPIHEWQQLQE 693
>SPAC14C4.01c ||SPAC19D5.08c|DUF1770 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 244
Score = 28.7 bits (61), Expect = 1.00
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 256 HQIYPVLSN*TWVTILHVAILL*VQFPKNLHL*QGLR 146
H +YP LS WV + H+ L +Q K H Q LR
Sbjct: 198 HVLYPFLSGGMWVFVRHIFQFLKLQ-EKGFHFGQSLR 233
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 406 KASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLD 543
++++VQ L++ LES K E V +KN I G LK+ ++
Sbjct: 400 QSANVQKLESTNRALESTIKTLEEDVYTMKNKIIELEGILKSANVE 445
>SPBC1703.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 28.3 bits (60), Expect = 1.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 421 QNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKAL--QLDLQKYQKKNEDFFSKISK 594
QN+Q Q S+L K+ + RV +++ + + A+ QL LQKYQK F S I+
Sbjct: 90 QNVQLQLSIL----KQQQNRVAAMESALQRIHLEITAMSEQLILQKYQKNRFFFMSSINA 145
Query: 595 KLECHDTFVSDIINNKI 645
+ + + N +
Sbjct: 146 LIRISRNCIKLLFKNSL 162
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 373 RPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAK 513
+P + ++ AQ +A + L+ Q+ L KEYEMR +++N +AK
Sbjct: 1174 KPWIDEIAAQREAYAGKILRYQR-----LTKEYEMRAEQIRNDYAAK 1215
>SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 227
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 451 ESLAKEYEMRVNRLKNVIS-AKRGYLKALQLD-LQKYQKKNEDFFSKISKKLE 603
+++ + Y+M++ R AK L +L+ L QK +D FS++ KKL+
Sbjct: 51 DAIDQTYDMKLKRASMAQKIAKSNVLNKSRLEILNSKQKVIDDIFSRVEKKLD 103
>SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 27.5 bits (58), Expect = 2.3
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -1
Query: 311 NFSGILSYSHILLISCTISSNIPCFKQLNMGNHFTRRNFALGTVSKKSSSLTRFTMFPNS 132
NFS I S +L IS N P K LN+GN + + + K+ L R + PN
Sbjct: 126 NFSNIFSLPANILEY--ISDNCPNLKALNIGNCGLVEDTGMVQIIKRCPYLNRL-IIPNC 182
Query: 131 FNMTRLS 111
+T +S
Sbjct: 183 RKLTDVS 189
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 27.1 bits (57), Expect = 3.0
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -1
Query: 479 LISYSLAKDSSRDFWFCKFCTSLAFICAFTS--PNCGLHNFLQSPTSLNFSFCFSRISNF 306
L+ Y A+D SR + T FI F+S C +F + + LNF FCF
Sbjct: 750 LLCYRRAEDDSRILTIIESWT--IFISRFSSVISRCSFTDF-EINSILNFFFCFLHTVEP 806
Query: 305 SGILSY 288
SG L++
Sbjct: 807 SGKLTF 812
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 27.1 bits (57), Expect = 3.0
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 376 PQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQL-DLQK 552
P + D Q+K N++ K LLE L E + +R + IS++ L QL L+K
Sbjct: 242 PMIIDNLKQLKKETRDNVEETKHLLEKLT-EVNVMCDRHMDAISSEE--LACHQLTQLKK 298
Query: 553 YQKKNEDFFSKISKKLE 603
+ ED +S+ K E
Sbjct: 299 VVQTLEDIYSEHKKVSE 315
>SPCC594.06c |||SNARE Vam7 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 27.1 bits (57), Expect = 3.0
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +1
Query: 28 ISVEKIKMSENLADLENDVEMLNSEVPFDNLVILKEFGNIVNLVKDEDFLETVPKAKLRR 207
++ EK++ S LA L+ V+ L SE P+ + ++K+F NI KDE ET + L
Sbjct: 73 VTNEKLRESRRLA-LQAYVQCL-SETPWIKMPVVKKFLNI----KDESEDETQGQF-LGP 125
Query: 208 VKWLPMFNCLKQGI 249
W+ +F K+ +
Sbjct: 126 TDWIQVFQDCKRNL 139
>SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 26.6 bits (56), Expect = 4.0
Identities = 8/28 (28%), Positives = 20/28 (71%)
Frame = +1
Query: 67 DLENDVEMLNSEVPFDNLVILKEFGNIV 150
D+E+++ ++N+ +PF ++ +FGN +
Sbjct: 281 DIEDNINLINTILPFSVTLMKNKFGNFL 308
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 224 CLIA*NRVYLMKWYKKSVICGNMKVC 301
C + +R LM+W + CGN VC
Sbjct: 2556 CSLCDSRFSLMEWRSQCRACGNSNVC 2581
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.6 bits (56), Expect = 4.0
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Frame = +1
Query: 364 KLWRPQLGDVKAQMKASDVQNLQNQKSL-LESLAKEYEMRVNRLKNVISAKRGYLKALQL 540
KL + D A + V+ + + S L+SL ++YE + KNV+ + Y+ L
Sbjct: 349 KLGESNVDDGMAASRYDTVKREKERLSEHLKSLQEQYEHIQSVYKNVLLDRESYIMRLGN 408
Query: 541 DL-QKYQKKNEDFFSKISKKLECHDTFVSDIINNKINVEEESWTDKDLHFDEIK*LPNRL 717
+ + + NE+ + +KL+ + + +KI E+ + K L +E + L
Sbjct: 409 KISENNELLNEN--RVLKEKLQTYLDKKESNVTSKIKSTAEN-SSKPLSMNEADERKDGL 465
Query: 718 NKIYFRN 738
N + F N
Sbjct: 466 NNLLFEN 472
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 5.3
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 421 QNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKKNEDFF-SKISKK 597
+ L N+KS + L KE+ R+N K +A+Q + + + E FF +K K
Sbjct: 293 EQLTNRKSGIPKLKKEHYERLNNEK----------RAIQQKITQMTNETESFFQAKEEKM 342
Query: 598 LECHDTFVSDI 630
+E D S++
Sbjct: 343 IETRDALNSEL 353
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 5.3
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = +1
Query: 427 LQNQKSLLES--LAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKK-----NEDFFSK 585
L+ +K +E L E LK+ +++RG K+ LQKY K NED SK
Sbjct: 215 LEREKMAIEERRLMNSEEREAQDLKDAEASRRGKKKSSMQFLQKYYHKGAFYQNEDIVSK 274
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/87 (19%), Positives = 41/87 (47%)
Frame = +1
Query: 403 MKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKKNEDFFS 582
+K S++ + K LL + ++++LK + + ++L L ++++ D
Sbjct: 677 LKESELVKSNDNKLLLNEQIESLNDQLSQLKTEMESVTTSKESLADYLSNLKERHNDELD 736
Query: 583 KISKKLECHDTFVSDIINNKINVEEES 663
++KKL + +S + K +EE +
Sbjct: 737 SLNKKLREFEGILSSNSSLKSEIEERN 763
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/48 (20%), Positives = 24/48 (50%)
Frame = +1
Query: 424 NLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKKN 567
NL+ +++ L+S K Y + + + +K+G K + Q + ++
Sbjct: 1334 NLREKRAFLDSQLKSYNEYIEQAMETLQSKKGKKKLIPFSKQYFHMRD 1381
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +1
Query: 427 LQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQ 558
L+NQ +++ +++ + R ++ + +R +K+L+ D KY+
Sbjct: 2034 LRNQLEDVQASETQWKFALRRTEHALQEERERVKSLETDFDKYR 2077
>SPAC4F8.02c |mrpl40|SPAC644.02|mitochondrial ribosomal protein
subunit L40|Schizosaccharomyces pombe|chr 1|||Manual
Length = 279
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 559 KKNEDFFSKISKKLECHDTFVSDIINNKIN 648
KKN D F++I+K L +T D+I I+
Sbjct: 244 KKNNDDFTEIAKDLVRAETAAEDLIKKPIS 273
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 207 TSQFCFRYSFQKIFIFDKVYD-VSEFFQYDEIIE 109
T + F+Y K+ + D V+D + F +D I E
Sbjct: 594 TDSYFFKYHLHKVVVSDNVHDPAASFSTFDGITE 627
>SPBC4F6.16c |ero11||ER oxidoreductin Ero1a|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 467
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 607 HDTFVSDIINNKINVEEESWTDK-DLHFDEIK*LPNRLNKIYF 732
H + + + N +VEE+ WT D ++ P+R+ I+F
Sbjct: 226 HASISTHVCQNYYDVEEQRWTQNLDWWRAKVGSFPDRIENIFF 268
>SPAC1687.16c |erg3||C-5 sterol desaturase Erg3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 300
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 613 TFVSDIINNKINVEEESWTDKDLHFDE 693
T + D + N +E+W DKDL +E
Sbjct: 240 TTLFDRLGNSFRAPDEAWFDKDLRQNE 266
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 311 NFSGILSYSHILLISCTISSNIPCFKQLNMGNHF 210
N I +YS I+L+S N+P F N+ HF
Sbjct: 90 NNKQIYTYSGIVLVSINPYQNLPEFYNDNLIKHF 123
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.4 bits (53), Expect = 9.3
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 343 NDVGDCKKLWRPQLGDVK-AQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRG 519
+++ + + + Q ++K A+ K S NLQ + + LAKE+ +++ L+ + A
Sbjct: 841 DELSSMESINKNQANELKLAKQKCS---NLQEKINFGNKLAKEHTEKISSLEKDLEAATK 897
Query: 520 YLKALQLDLQKYQKKNEDFFS 582
L +L+ + +N+ S
Sbjct: 898 TASTLSKELKTVKSENDSLKS 918
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,913,278
Number of Sequences: 5004
Number of extensions: 59733
Number of successful extensions: 261
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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