Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d18
(785 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 35 0.084
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 34 0.15
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 31 1.4
12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120... 29 5.5
10_08_0371 + 17265691-17265788,17265873-17265971,17266586-172666... 29 5.5
08_02_0761 - 20889724-20889849,20889894-20890055,20890307-208904... 29 5.5
06_02_0333 + 14567509-14568081,14568109-14568438,14568642-145695... 29 5.5
04_01_0630 - 8354628-8355803,8355837-8355926 29 5.5
07_01_1174 + 11097044-11097070,11097950-11098096,11098381-110984... 28 7.3
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 28 7.3
03_02_0961 + 12759701-12760054,12760294-12760420,12760719-127611... 28 7.3
09_06_0311 + 22218219-22218421,22219157-22219422,22219881-222200... 28 9.7
04_04_1152 - 31289365-31289457,31289559-31289637,31289716-312897... 28 9.7
04_03_0190 + 12448027-12450825 28 9.7
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 34.7 bits (76), Expect = 0.084
Identities = 19/95 (20%), Positives = 49/95 (51%)
Frame = +1
Query: 361 KKLWRPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQL 540
+KL ++ ++K + + V + + +S +ESLA + + + L++ ++ K LK ++
Sbjct: 275 RKLLEAEMSELK-HLYGNVVSDYEEARSTIESLAAKRDGEIASLRSSLAEKVTLLKEMEY 333
Query: 541 DLQKYQKKNEDFFSKISKKLECHDTFVSDIINNKI 645
+ +++NED S + + E +++ K+
Sbjct: 334 GKARLEQENEDMRSSLKEHQEAQIGGADAVVSLKV 368
>12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/107 (20%), Positives = 50/107 (46%)
Frame = +1
Query: 343 NDVGDCKKLWRPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGY 522
ND+ K L + ++ + + +++Q K +E+ V +L++++
Sbjct: 737 NDIEKEKALHKELTAQLEVKFEEEKARSVQTVKESMEAQLCSSNTEVLKLRDIV------ 790
Query: 523 LKALQLDLQKYQKKNEDFFSKISKKLECHDTFVSDIINNKINVEEES 663
KAL+ +++K + +ED +++ K+E TF + I E +S
Sbjct: 791 -KALENEVEKEKALHEDLSAQLEAKIEAERTFSVEAIKESFQSELQS 836
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +1
Query: 22 IAISVEKIKMSENLADLENDVEMLNSEVPFDNLVILKEFGNIVNLVKDEDF-LETVPKAK 198
I + +K ++ + L D E + ML ++ N V+ K + KD D L T + +
Sbjct: 529 IQLEAKKHRLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELLTEEERR 588
Query: 199 LRRVKWLPMFNCL---KQGIFDEMVQEISNMWEYESM 300
+ R L M + ++G+F+ +++EI W+++ +
Sbjct: 589 IFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEV 625
>12_02_0012 -
12309332-12310228,12311087-12311669,12311945-12312051,
12313190-12313237,12315139-12315216,12315300-12315500,
12315612-12315797,12315870-12316007,12318311-12318416,
12318529-12318587
Length = 800
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 400 QMKASDVQNLQNQKSLLESLAKEYEMRVNR---LKNVISAKRGYLKALQLDLQKYQKKNE 570
Q + D++ L + K + E + KE E + L+NV K LKA + DL K + +
Sbjct: 175 QASSCDLKELVS-KFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHG 233
Query: 571 DFFSKISKKLE 603
D+ + KLE
Sbjct: 234 DYKEDVGTKLE 244
>10_08_0371 +
17265691-17265788,17265873-17265971,17266586-17266628,
17267250-17267321,17267400-17267495,17267609-17267842,
17267914-17268097,17268247-17268358,17268447-17268533,
17268703-17268841,17269628-17269718,17270045-17270154,
17270309-17270413,17270982-17271055,17271379-17271454,
17271786-17272022,17272419-17272490,17273082-17273153,
17273240-17273304,17273306-17273383,17273384-17273486,
17273769-17273858,17274873-17274980,17275063-17275113,
17276126-17276203,17276284-17276346,17276944-17277140,
17277243-17277312,17277640-17277828
Length = 1030
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 532 LQLDLQKYQKKNEDFFSKISKKLECHDTFVSDI 630
+ LDL KY K + D+F+ IS LE + V+++
Sbjct: 845 ISLDLLKYPKLSRDYFALISHLLEVYPEKVANL 877
>08_02_0761 -
20889724-20889849,20889894-20890055,20890307-20890406,
20890597-20890604
Length = 131
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 367 LWRPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRL 492
+WR LG Q+ DV++LQN +S LE K +R L
Sbjct: 1 MWRQLLGQ---QLSGLDVEDLQNLESKLEMSLKNIRLRKGSL 39
>06_02_0333 +
14567509-14568081,14568109-14568438,14568642-14569550,
14569598-14569777,14570416-14570698,14571339-14571832
Length = 922
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 358 CKKLWRPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYE 474
C R LG++ +M DVQ L+ Q +L E++A+ E
Sbjct: 846 CSSSSRWDLGEITRRMDTLDVQTLKIQYNLTENIAQTQE 884
>04_01_0630 - 8354628-8355803,8355837-8355926
Length = 421
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +1
Query: 388 DVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLK 528
D MK D ++ NQK L L + M NRL +S K GY K
Sbjct: 13 DFDIYMKVPDGIDIPNQKKSLYGLKQSGRMWYNRLSEFLSLK-GYTK 58
>07_01_1174 +
11097044-11097070,11097950-11098096,11098381-11098424,
11098915-11098952,11099787-11099877,11100873-11100978,
11101062-11101132,11101221-11101290,11101547-11101609,
11101883-11102058,11102104-11102128,11102729-11102800,
11102903-11103004,11103089-11103163,11103749-11103871,
11104320-11104433,11106012-11106053,11106328-11106444,
11106983-11107039,11107424-11107441
Length = 525
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +1
Query: 382 LGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQK 561
LG+VK ++K D + +KSL S ++E+ + L N + A + +A+ + L QK
Sbjct: 322 LGEVKFELKDYDGSSSSYRKSLSASENIDFEV-LRGLTNALLAAKKPDQAVDVILSCRQK 380
Query: 562 KNEDFFSKISKKLECHD 612
NE ++++ +D
Sbjct: 381 LNEKSQTQVANLAAAND 397
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 445 LLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKKNED 573
LLE +E + +N+LK+++ K L Q +L+K E+
Sbjct: 220 LLEKANQEMNLELNKLKHMLKQKHEELNEKQAELEKLNISTEE 262
>03_02_0961 +
12759701-12760054,12760294-12760420,12760719-12761167,
12761369-12761590,12761672-12761980,12762092-12762430,
12762504-12762584,12762661-12762756,12762846-12763220,
12763400-12763531,12763962-12764132
Length = 884
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 415 DVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKKNEDF 576
DV+ QN+ + + SL +EM+ R+K + S R Y + L+ D K + + DF
Sbjct: 315 DVRERQNRLAKMRSLLFRHEMKAKRIKKIKS--RTYHRMLKKD--KLKAASADF 364
>09_06_0311 +
22218219-22218421,22219157-22219422,22219881-22220050,
22220149-22220365,22220798-22221021,22221559-22221738,
22221875-22222013,22222107-22222255,22223394-22223505,
22223998-22224506,22224661-22224784,22224904-22225178,
22225507-22225626,22225707-22225769,22225861-22226052,
22226381-22226440,22226535-22226738,22226926-22227051,
22227093-22227254,22227357-22227476,22227665-22227820,
22227895-22227957,22228041-22228168,22228524-22228920,
22229442-22229544,22229646-22229776,22230096-22230167,
22230472-22230553,22231083-22231190,22231288-22231429,
22231659-22231698,22231746-22231876,22232215-22232301,
22232395-22232605,22232687-22232741,22232836-22232927,
22233011-22233071,22233361-22233719
Length = 2010
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 409 ASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKA 531
AS N + +S A YE++ +RL IS +GYL A
Sbjct: 367 ASSTVEFWNLSQVPDSSAGSYEVQTSRLLTPISKGKGYLDA 407
>04_04_1152 -
31289365-31289457,31289559-31289637,31289716-31289758,
31289846-31290037,31290302-31290377,31290482-31290535,
31291274-31291342,31291437-31291700
Length = 289
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 46 KMSENLADLENDVEMLNSEVPFDNLVILKEFGNIVNLVKDEDFLETVPKAK 198
KM+ NLA LE + L + DNL+ L E G+ + + + VP K
Sbjct: 104 KMARNLAKLEAFKKQLMKSLSEDNLLQLSEIGDDRDFDANNNLTARVPSWK 154
>04_03_0190 + 12448027-12450825
Length = 932
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/90 (24%), Positives = 42/90 (46%)
Frame = +1
Query: 382 LGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQK 561
LG + A + A +Q ++N SL + R+NR+K + +L Q DLQ Q
Sbjct: 10 LGKITAALGADVLQQIRNLLPTEVSLFGQLTGRMNRIKKELFVIHAFLS--QADLQGVQT 67
Query: 562 KNEDFFSKISKKLECHDTFVSDIINNKINV 651
+ + + +K+ V D+I+ +++
Sbjct: 68 RTVEAWVDAVRKVALD---VEDVIDEYVHL 94
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,192,852
Number of Sequences: 37544
Number of extensions: 295844
Number of successful extensions: 917
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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