Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d18
(785 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 34 0.13
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 34 0.13
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 32 0.40
Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical pr... 31 0.93
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 30 1.6
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 30 1.6
U61957-1|AAB03419.1| 238|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z75550-4|CAA99923.2| 335|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical pr... 28 8.7
U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical p... 28 8.7
U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical pr... 28 8.7
U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical pr... 28 8.7
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 388 DVKAQMKASDVQNLQNQKSLLESLAKEYEMR-VNRLKNVISAKRGYLKALQLDLQKYQKK 564
D +A+ KA + + + ++ ++ +N+L+ + +AK KALQL +Q+
Sbjct: 1361 DEEAESKADLTRQISKLNAEIQQWKARFDSEGLNKLEEIEAAK----KALQLKVQELTDT 1416
Query: 565 NEDFFSKISKKLECHDTFVSDIINNKINVEE 657
NE F+KI+ + + + D+ + + +VE+
Sbjct: 1417 NEGLFAKIASQEKVRFKLMQDLDDAQSDVEK 1447
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 388 DVKAQMKASDVQNLQNQKSLLESLAKEYEMR-VNRLKNVISAKRGYLKALQLDLQKYQKK 564
D +A+ KA + + + ++ ++ +N+L+ + +AK KALQL +Q+
Sbjct: 1361 DEEAESKADLTRQISKLNAEIQQWKARFDSEGLNKLEEIEAAK----KALQLKVQELTDT 1416
Query: 565 NEDFFSKISKKLECHDTFVSDIINNKINVEE 657
NE F+KI+ + + + D+ + + +VE+
Sbjct: 1417 NEGLFAKIASQEKVRFKLMQDLDDAQSDVEK 1447
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 32.3 bits (70), Expect = 0.40
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 436 QKSLLESLA--KEYEMRVNRLKNVISAKRGYLKALQLDLQKYQK-KNEDFFSKISKKLE- 603
++ + E LA EYE VN+LK+ ++ L+ Q DL+K +++ I K E
Sbjct: 118 ERRVYEELAPFSEYEKNVNKLKDKLNLVSTDLEIAQKDLEKENSMTHQESLDAIQMKYEG 177
Query: 604 CHDTFVSDIINNKINVE 654
D V+DI + ++ E
Sbjct: 178 MKDALVTDIFASSVSKE 194
>Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical
protein C53D6.5 protein.
Length = 153
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +1
Query: 355 DCKKLWRPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKAL 534
+ K +R + ++ + K D + K+ + L K+++ R+NR+K I A LK
Sbjct: 79 ELNKFFRQRTEKLEIEQKLKDPKL---DKATSDELKKQWQERINRIKKYIEASDDKLKGY 135
Query: 535 QLDLQKYQKK 564
QK KK
Sbjct: 136 DNHTQKIVKK 145
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 31.1 bits (67), Expect = 0.93
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 382 LGDVKAQMKASDVQNLQNQKSLL-ESLAK--EYEMRVNRLKNVISAKRGYLKALQLDLQK 552
L + ++Q + S L+N++SLL ES AK EY R+ +L+ + K L + +L+
Sbjct: 69 LAEYRSQHQRSTRSELENEESLLEESSAKEEEYLQRIAKLEADLKKKEQELAEKKEELES 128
Query: 553 YQKKN 567
+KK+
Sbjct: 129 IEKKH 133
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +1
Query: 382 LGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQK 561
LG+++A++ LQ +K + E L KE+E ++ L+ + K L+K QK
Sbjct: 358 LGELEAELDRQKELKLQLEKDM-EDLRKEHEGQMAELEKRLEKVSEKEKEAIEQLEKIQK 416
Query: 562 KNEDFFSKISKKLECHDTFVSDIINNKINVEE 657
+N+ + E + IN K ++E
Sbjct: 417 ENKTIVKENVYLSESKQVLLESEINLKNELDE 448
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +1
Query: 382 LGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQK 561
LG+++A++ LQ +K + E L KE+E ++ L+ + K L+K QK
Sbjct: 358 LGELEAELDRQKELKLQLEKDM-EDLRKEHEGQMAELEKRLEKVSEKEKEAIEQLEKIQK 416
Query: 562 KNEDFFSKISKKLECHDTFVSDIINNKINVEE 657
+N+ + E + IN K ++E
Sbjct: 417 ENKTIVKENVYLSESKQVLLESEINLKNELDE 448
>U61957-1|AAB03419.1| 238|Caenorhabditis elegans Hypothetical
protein AC7.3 protein.
Length = 238
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Frame = +1
Query: 376 PQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKY 555
P+L + QN Q K + + ++ + S + +LKA++ ++ Y
Sbjct: 127 PELEKYQKNRSTDPEQNQQMDKIMNRFTELQRLLKSMIQEGTASIQSQHLKAMRYSIELY 186
Query: 556 QKKNEDF---FSK-------ISKKLECHDTFVSDIINNKINVEEESWTDKDL 681
QK+NE + F+ ++ K + +T V + NK +E+ S DKDL
Sbjct: 187 QKQNEQWSRSFASFANLKPDVTVKAKKTETPVEESKKNKKKIEKLSEGDKDL 238
>Z75550-4|CAA99923.2| 335|Caenorhabditis elegans Hypothetical
protein T22C1.6 protein.
Length = 335
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 526 KALQLDLQKYQKKNEDFFSKISKKLECHDTFVSDI--INNK-INVEEESWTDK 675
KAL+ +Q+Y K + S +SK E D F +I +N K + VE+E + K
Sbjct: 225 KALREQVQEYSAKYSELTSCLSKSNEAFDKFKDEISRVNKKCMQVEKEGLSYK 277
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +1
Query: 343 NDVGDCKKLW---RPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRV 483
+++GD KK+ R + + QMK S+ Q ++N + +ESL K +E ++
Sbjct: 516 SELGDLKKMLDEARKKFEEDVEQMKNSNQQVIRNHANAVESLQKTHETQI 565
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +1
Query: 343 NDVGDCKKLW---RPQLGDVKAQMKASDVQNLQNQKSLLESLAKEYEMRV 483
+++GD KK+ R + + QMK S+ Q ++N + +ESL K +E ++
Sbjct: 584 SELGDLKKMLDEARKKFEEDVEQMKNSNQQVIRNHANAVESLQKTHETQI 633
>Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical
protein T12G3.2c protein.
Length = 888
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 412 SDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRG 519
S+ Q +Q K+L+ L E + RVNR+K + +RG
Sbjct: 32 SEEQRMQKVKNLICKLLTEIDGRVNRIKQNNNHQRG 67
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical
protein T12G3.2b protein.
Length = 912
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 412 SDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRG 519
S+ Q +Q K+L+ L E + RVNR+K + +RG
Sbjct: 32 SEEQRMQKVKNLICKLLTEIDGRVNRIKQNNNHQRG 67
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 412 SDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRG 519
S+ Q +Q K+L+ L E + RVNR+K + +RG
Sbjct: 32 SEEQRMQKVKNLICKLLTEIDGRVNRIKQNNNHQRG 67
>Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical
protein K09C8.4 protein.
Length = 633
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = -1
Query: 326 FSRISNFSGILSYSHILLISCTISSNIPCFKQLNMGNHFTRRNFALGTVSKKSSSLTRFT 147
+ I + +G L +L+I + P + LN+ N +R++ + + K+ R T
Sbjct: 456 YGTIIDQTGNLKQKEVLVIPA-LEMTYPQLR-LNLSNFLSRKDLVIEHLLNKTIQTFRET 513
Query: 146 MFPNSFNMTRLSK 108
++P+S T +SK
Sbjct: 514 IWPSSHVPTNISK 526
>U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical
protein F55C12.1a protein.
Length = 454
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/97 (22%), Positives = 38/97 (39%)
Frame = +1
Query: 385 GDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKK 564
GD A S N N + S +E M ++ + + + LK +L++
Sbjct: 41 GDQDALNDFSSQMNQLNSFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD 100
Query: 565 NEDFFSKISKKLECHDTFVSDIINNKINVEEESWTDK 675
NED F ++ + T + + +E ESW K
Sbjct: 101 NEDRFKQLLSDEKARGTESMSRLKREKELETESWNLK 137
>U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical
protein F55C12.1b protein.
Length = 471
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/97 (22%), Positives = 38/97 (39%)
Frame = +1
Query: 385 GDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKK 564
GD A S N N + S +E M ++ + + + LK +L++
Sbjct: 58 GDQDALNDFSSQMNQLNSFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD 117
Query: 565 NEDFFSKISKKLECHDTFVSDIINNKINVEEESWTDK 675
NED F ++ + T + + +E ESW K
Sbjct: 118 NEDRFKQLLSDEKARGTESMSRLKREKELETESWNLK 154
>U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical
protein F55C12.1d protein.
Length = 468
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/97 (22%), Positives = 38/97 (39%)
Frame = +1
Query: 385 GDVKAQMKASDVQNLQNQKSLLESLAKEYEMRVNRLKNVISAKRGYLKALQLDLQKYQKK 564
GD A S N N + S +E M ++ + + + LK +L++
Sbjct: 55 GDQDALNDFSSQMNQLNSFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD 114
Query: 565 NEDFFSKISKKLECHDTFVSDIINNKINVEEESWTDK 675
NED F ++ + T + + +E ESW K
Sbjct: 115 NEDRFKQLLSDEKARGTESMSRLKREKELETESWNLK 151
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 27.9 bits (59), Expect = 8.7
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Frame = +1
Query: 388 DVKAQMKASDVQN-LQNQKSLLE-SLAKEYEMRVNR---LKNVISAKRG---YLKALQLD 543
D K+ + ++ + + N KS+LE +L +E E R K +++K +LK +
Sbjct: 92 DTKSCSECTEFKTYMNNMKSVLEETLEEEKEKNKKRDEASKKTLNSKNEEIEHLKKRVIS 151
Query: 544 LQKYQKKNEDFFSKISKKLE 603
L Q +NE SKISK E
Sbjct: 152 LSNSQSENETMKSKISKLTE 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,765,568
Number of Sequences: 27780
Number of extensions: 322359
Number of successful extensions: 1172
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -