Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28d16
         (539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.24 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   5.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   5.2  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 22/88 (25%), Positives = 36/88 (40%)
 Frame = +1

Query: 220 NFFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKSPG 399
           NF +N L S      + P+  K    EK  +P Q+  S+  +  +          P+S  
Sbjct: 668 NFLKNALMSNNILPPESPTRDKSKQNEKSPSPQQRSPSVTDLSTKDG-----TTVPES-N 721

Query: 400 ENSSHSKRLAVKKVISSYFGKSQKVTSA 483
             SS S   A++K+I   F    +  S+
Sbjct: 722 NGSSPSVLNAIEKLIEKSFDSRSRQNSS 749


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 160 TDSLELTSYKNPKTWKKSISNFFRNQLRSTK 252
           T   ++ +YKNPK +K +I+    +   +T+
Sbjct: 309 TGGSQILTYKNPKPYKMAIAFMLAHPYGTTR 339


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 160 TDSLELTSYKNPKTWKKSISNFFRNQLRSTK 252
           T   ++ +YKNPK +K +I+    +   +T+
Sbjct: 310 TGGSQILTYKNPKPYKMAIAFMLAHPYGTTR 340


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 160 TDSLELTSYKNPKTWKKSISNFFRNQLRSTK 252
           T   ++ +YKNPK +K +I+    +   +T+
Sbjct: 310 TGGSQILTYKNPKPYKMAIAFMLAHPYGTTR 340


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 529 ICITFLFVYMFIFHHPPT*LFDFCQ 455
           I ITF+ V +FI    P  +FD  Q
Sbjct: 250 IKITFVIVSVFILCWSPYIIFDLLQ 274


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +1

Query: 184 YKNPKTWKKSISNFFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQ 321
           Y N      S  N + + +  TK++E  +     DN E K   P+Q
Sbjct: 91  YSNLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLSDPNQ 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.129    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,219
Number of Sequences: 336
Number of extensions: 2592
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)