Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28d16
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    26   0.93 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   1.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   1.6  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.7  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 193 PKTWKKSISNFFRNQLRSTKSNEGDR 270
           PK     I N+FRN++   ++NEG+R
Sbjct: 577 PKYLYDIIGNYFRNRVLLYETNEGNR 602


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +1

Query: 70  CPEGSQPENDTLSKSNDICQKKPNKVPAEG-TDSLELTSYKN 192
           CP+G  P+N        +C   P   P EG   S  + +YK+
Sbjct: 280 CPKGKMPQNSECVPCKGVC---PKTCPGEGIVHSDNIGNYKD 318


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
 Frame = +1

Query: 109  KSNDICQKKPNKVPAEGTDSLELTSYKNP---------KTWKKSISNFFRNQLRSTKSNE 261
            KSN   Q++  +VP  GT+    TS   P         ++  + +++F  + L S ++ +
Sbjct: 1286 KSNHQQQQQQQQVPGSGTECSASTSEPAPAAPSNSTPSRSVARIVTSFTDSPLFSRRNRQ 1345

Query: 262  GDRPSGSKDNFEEKEITPD-QKWQSLGKVFRRQSFAETWNKSPKSPGENSS 411
               P       + +  TP   +W +      RQS A++ + SPK    N S
Sbjct: 1346 PKAPDADSSKPQSESNTPILLRWNA--NRHNRQSKADSLD-SPKKHRRNGS 1393


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 175  LTSYKNPKTWKKSISNFFRNQLRSTKSNEGDR 270
            L  +KN + W    +NF RN  +  + + G R
Sbjct: 1075 LYQHKNKQDWSNLEANFKRNYYKEGELDLGHR 1106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.129    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,829
Number of Sequences: 2352
Number of extensions: 9939
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)