Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d15
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z81035-6|CAB02739.1| 119|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 3.6
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z36719-4|CAA85315.2| 513|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 28 8.3
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 28 8.3
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 8.3
U41037-2|AAA82388.3| 651|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 8.3
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 62.1 bits (144), Expect = 4e-10
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Frame = +2
Query: 212 RQPRFRPPYWYVP-KERVWTDDY-LTKENKQFLEEVI-KDKLEAQT-ALEKKALTSPILN 379
R+ P W P KE V +++ K LE VI K+ L A T A + T+ +
Sbjct: 35 RRRTLTPAPWLPPVKESVPKSSVGISQGTKNLLETVIEKETLAASTIAFQNSQETNVSVV 94
Query: 380 DVKKNVTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVVDNHVIKYIPPEE-YKPM 556
D+ + ++RVGL+ RKIG P W +G ++ T+L+V +NHV+ PE YK
Sbjct: 95 DIPDS------SRRVGLVVRKIGMLPQWTNEGNRILCTVLEVDENHVVSITSPEAWYKSS 148
Query: 557 IKSNVKWVEKQ-KYGCILVGAENIDPSVVTKDYCGIFDSVGMLPKKAPLQICCIT 718
K + + VGA N DP+ T Y F G +P K L +T
Sbjct: 149 AVGKRKAFNRHGPMWRVTVGAGNDDPTKYTLGYRRQFVRAG-IPVKEKLGCFLVT 202
>Z81035-6|CAB02739.1| 119|Caenorhabditis elegans Hypothetical
protein C15H11.8 protein.
Length = 119
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 647 DYCGIFDSVGMLPKKAPLQICCITRICFTKW 739
D+CG ++ LP +AP + C ++C T+W
Sbjct: 11 DFCGYCGAILELPAQAPATVSC--KVCSTRW 39
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 458 LWCKDGKKVSTTLLQVVDNHV--IKYIPPEEYKPMIKS 565
+W + +K +QVVDN++ +K++P KP+ +S
Sbjct: 656 VWIHEHRKRDVMTVQVVDNNLVAVKHVPNSSQKPIFQS 693
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 458 LWCKDGKKVSTTLLQVVDNHV--IKYIPPEEYKPMIKS 565
+W + +K +QVVDN++ +K++P KP+ +S
Sbjct: 656 VWIHEHRKRDVMTVQVVDNNLVAVKHVPNSSQKPIFQS 693
>Z36719-4|CAA85315.2| 513|Caenorhabditis elegans Hypothetical
protein C06C3.8 protein.
Length = 513
Score = 28.7 bits (61), Expect = 4.8
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = +2
Query: 173 RFDNAACNIRGASRQPRFRPPYWYVPKERVWTDDYLTKENKQFLEEVIKDKLEAQTALEK 352
R D N R+P ++ P Y P+E D + ++L+ KL Q K
Sbjct: 197 REDYLVINSSDNCRRPLYKQPCPYPPEELPKPDPERKMSHTEYLQLSESPKLGVQKIGSK 256
Query: 353 KALTSP-ILNDVKKNVTWTPQTKRVGLIARKIGNYPLWCKDGKKVSTTLLQVV 508
L ILN++ K+ K G+ + N ++ + GK ++ L+Q +
Sbjct: 257 DVLLKKVILNEISKSPAIWNTYKANGIYSEVAVN--VFKRTGKLLNIKLIQSI 307
>Z92827-5|CAB07325.1| 732|Caenorhabditis elegans Hypothetical
protein C29F7.6 protein.
Length = 732
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 343 IRKKSIDLSHFKRCQ-KKCNMD 405
I S++LSH +RCQ KKC D
Sbjct: 684 IEDASVELSHVERCQGKKCKRD 705
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 248 PKERVWTDDY-LTKENKQFLEEVIKDKLEAQTALEKKALTSPI---LNDVKKNVTWTPQT 415
P+ + +Y LT+++ F + L + LE KA + LN+++KN TP+
Sbjct: 932 PESPFFATEYALTEQSVDFRFTKLAVSLHQEGVLELKAFGEALQAQLNELQKN---TPEE 988
Query: 416 KRVGLIARKI 445
K+V ARKI
Sbjct: 989 KKVEETARKI 998
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 248 PKERVWTDDY-LTKENKQFLEEVIKDKLEAQTALEKKALTSPI---LNDVKKNVTWTPQT 415
P+ + +Y LT+++ F + L + LE KA + LN+++KN TP+
Sbjct: 932 PESPFFATEYALTEQSVDFRFTKLAVSLHQEGVLELKAFGEALQAQLNELQKN---TPEE 988
Query: 416 KRVGLIARKI 445
K+V ARKI
Sbjct: 989 KKVEETARKI 998
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 363 VNAFFSNAVCASSLSFITSSKNCLFSLVR*SSVHTL 256
VN F N + S+ +S+ CLF L+R +V+ L
Sbjct: 1510 VNEFTGNTLLTESVVKGENSRTCLFGLIRAENVYVL 1545
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/46 (28%), Positives = 30/46 (65%)
Frame = +2
Query: 251 KERVWTDDYLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVK 388
KER+ ++ +EN++ L++VI ++ Q L++++ S L+D++
Sbjct: 864 KERLLKMEHDFRENEKKLDQVIVERAVIQEQLQQESENSAELDDIR 909
>U41037-2|AAA82388.3| 651|Caenorhabditis elegans Hypothetical
protein T24C12.3 protein.
Length = 651
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 557 IKSNVKWVEKQKYGCILVGAENIDPSVVTK 646
I V+++E CI+ G EN+ PS T+
Sbjct: 175 IPKTVEYLETHSVNCIVYGQENVFPSFFTR 204
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.9 bits (59), Expect = 8.3
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Frame = +2
Query: 275 YLTKENKQFLEEVIKDKLEAQTALEKKALTSPILNDVKKNVTWTPQTKRVGLIARKIGNY 454
Y + + ++F+E + KLE + LEK + N QTK L K
Sbjct: 144 YESDDKEEFIETL---KLELENRLEKLETKGSGFRMNRINKLQMYQTKMKSLTGAKYIEL 200
Query: 455 PLWCKDGKKVSTTLLQVVDNH-----VIKYIPPEEYKPMIKSN 568
P W K+ K V ++ DN V+ ++ PE+ P SN
Sbjct: 201 PAWIKNKKAVIN--IKNEDNFCFMWCVLAHLFPEKKNPQRVSN 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,655,324
Number of Sequences: 27780
Number of extensions: 383996
Number of successful extensions: 1146
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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