Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d14
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006479-1|AAH06479.1| 176|Homo sapiens chromosome 19 open read... 102 1e-21
BC001080-1|AAH01080.1| 176|Homo sapiens chromosome 19 open read... 102 1e-21
AC005253-1|AAC25583.1| 183|Homo sapiens R26445_1 protein. 102 1e-21
AB053313-1|BAB69021.1| 423|Homo sapiens ALS2CR11 protein. 33 0.85
AL591502-3|CAI12581.1| 941|Homo sapiens gamma-aminobutyric acid... 33 1.1
AL445495-1|CAD13322.2| 941|Homo sapiens gamma-aminobutyric acid... 33 1.1
AL356282-1|CAH72233.1| 941|Homo sapiens gamma-aminobutyric acid... 33 1.1
AL353782-5|CAH71298.1| 941|Homo sapiens gamma-aminobutyric acid... 33 1.1
AJ012188-1|CAA09942.1| 941|Homo sapiens GABAB receptor, subunit... 33 1.1
AF099033-1|AAD45867.1| 941|Homo sapiens gamma-aminobutyric acid... 33 1.1
AF095784-1|AAD30389.1| 941|Homo sapiens GABA-B receptor R2 prot... 33 1.1
AF074483-1|AAD03336.1| 941|Homo sapiens GABA-B receptor 2 protein. 33 1.1
AF069755-1|AAC99345.1| 941|Homo sapiens orphan G protein-couple... 33 1.1
AF056085-1|AAC63228.1| 941|Homo sapiens GABA-B receptor protein. 33 1.1
AK222978-1|BAD96698.1| 178|Homo sapiens PEST-containing nuclear... 32 1.5
AB037675-1|BAB03501.1| 178|Homo sapiens PEST-containing nuclear... 32 1.5
BC035071-1|AAH35071.2| 883|Homo sapiens GABBR2 protein protein. 31 2.6
BC101470-1|AAI01471.1| 1478|Homo sapiens FYVE and coiled-coil do... 31 4.5
BC101468-1|AAI01469.1| 1478|Homo sapiens FYVE and coiled-coil do... 31 4.5
AL833308-1|CAD89924.1| 878|Homo sapiens hypothetical protein pr... 31 4.5
AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil do... 31 4.5
>BC006479-1|AAH06479.1| 176|Homo sapiens chromosome 19 open reading
frame 50 protein.
Length = 176
Score = 102 bits (244), Expect = 1e-21
Identities = 53/117 (45%), Positives = 73/117 (62%)
Frame = +1
Query: 133 TAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKK 312
+A VF + MV+ DV II AQKNML RFEKT EML N N LS++RL+ S F
Sbjct: 6 SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 65
Query: 313 HTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPS 483
HT+ L EM++DL+ IF++IR +K KL+ Q+PEA+ S + D++ + PS
Sbjct: 66 HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEASFLEEE---DEDPIPPS 119
>BC001080-1|AAH01080.1| 176|Homo sapiens chromosome 19 open reading
frame 50 protein.
Length = 176
Score = 102 bits (244), Expect = 1e-21
Identities = 53/117 (45%), Positives = 73/117 (62%)
Frame = +1
Query: 133 TAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKK 312
+A VF + MV+ DV II AQKNML RFEKT EML N N LS++RL+ S F
Sbjct: 6 SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 65
Query: 313 HTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPS 483
HT+ L EM++DL+ IF++IR +K KL+ Q+PEA+ S + D++ + PS
Sbjct: 66 HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEASFLEEE---DEDPIPPS 119
>AC005253-1|AAC25583.1| 183|Homo sapiens R26445_1 protein.
Length = 183
Score = 102 bits (244), Expect = 1e-21
Identities = 53/117 (45%), Positives = 73/117 (62%)
Frame = +1
Query: 133 TAPEVFVQGLAGMVDQTDVEVIIRAQKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKK 312
+A VF + MV+ DV II AQKNML RFEKT EML N N LS++RL+ S F
Sbjct: 13 SASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLH 72
Query: 313 HTQLLFEMRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPS 483
HT+ L EM++DL+ IF++IR +K KL+ Q+PEA+ S + D++ + PS
Sbjct: 73 HTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEASFLEEE---DEDPIPPS 126
>AB053313-1|BAB69021.1| 423|Homo sapiens ALS2CR11 protein.
Length = 423
Score = 33.1 bits (72), Expect = 0.85
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Frame = +1
Query: 208 QKNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTK 387
Q + L F T + L+ + KKH + +K+++ ++ K I ++
Sbjct: 178 QSSTLTHFNTETGEKSKLEDQYCQTLKGNNNNNKKHLVTFAQYKKEIQTLYIKPDEICSE 237
Query: 388 LSSQYPE--AYKEAVAESLANRKP-----LVDDEDLKPSEEKPESKM 507
+++PE +++ V E N KP L EDLKP K ++
Sbjct: 238 KCAKFPEIQSFQYKVVEDEKNLKPHLFPELFKIEDLKPKVRKERDRV 284
>AL591502-3|CAI12581.1| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + + E+ KDLE + +++ K
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 824 TYIKQNHYQE 833
>AL445495-1|CAD13322.2| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + + E+ KDLE + +++ K
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 824 TYIKQNHYQE 833
>AL356282-1|CAH72233.1| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + + E+ KDLE + +++ K
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 824 TYIKQNHYQE 833
>AL353782-5|CAH71298.1| 941|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 2 protein.
Length = 941
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + + E+ KDLE + +++ K
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 824 TYIKQNHYQE 833
>AJ012188-1|CAA09942.1| 941|Homo sapiens GABAB receptor, subunit 2
protein.
Length = 941
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + + E+ KDLE + +++ K
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 824 TYIKQNHYQE 833
>AF099033-1|AAD45867.1| 941|Homo sapiens gamma-aminobutyric acid
type B receptor 2 protein.
Length = 941
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + + E+ KDLE + +++ K
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 824 TYIKQNHYQE 833
>AF095784-1|AAD30389.1| 941|Homo sapiens GABA-B receptor R2
protein.
Length = 941
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + + E+ KDLE + +++ K
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 824 TYIKQNHYQE 833
>AF074483-1|AAD03336.1| 941|Homo sapiens GABA-B receptor 2 protein.
Length = 941
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + + E+ KDLE + +++ K
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 824 TYIKQNHYQE 833
>AF069755-1|AAC99345.1| 941|Homo sapiens orphan G protein-coupled
receptor HG20 protein.
Length = 941
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + + E+ KDLE + +++ K
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 824 TYIKQNHYQE 833
>AF056085-1|AAC63228.1| 941|Homo sapiens GABA-B receptor protein.
Length = 941
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + + E+ KDLE + +++ K
Sbjct: 764 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHRLRMKITELDKDLEEVTMQLQDTPEKT 823
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 824 TYIKQNHYQE 833
>AK222978-1|BAD96698.1| 178|Homo sapiens PEST-containing nuclear
protein variant protein.
Length = 178
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 361 KKIRAIKTKLSSQYPEAYKEAVA-ESLANRKPLVDDEDLKPSEEKPESKM 507
KK AI KL S P+ +A ++L+ +DED +P E PE+KM
Sbjct: 81 KKASAISIKLGSSKPKETVPTLAPKTLSVAAAFNEDEDSEPEEMPPEAKM 130
>AB037675-1|BAB03501.1| 178|Homo sapiens PEST-containing nuclear
protein protein.
Length = 178
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 361 KKIRAIKTKLSSQYPEAYKEAVA-ESLANRKPLVDDEDLKPSEEKPESKM 507
KK AI KL S P+ +A ++L+ +DED +P E PE+KM
Sbjct: 81 KKASAISIKLGSSKPKETVPTLAPKTLSVAAAFNEDEDSEPEEMPPEAKM 130
>BC035071-1|AAH35071.2| 883|Homo sapiens GABBR2 protein protein.
Length = 883
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +1
Query: 211 KNMLQRFEKTTEMLTNCNQLSASRLRAASTEFKKHTQLLFEMRKDLEFIFKKIRAIKTKL 390
+N + KT+ +T+ NQ S SRL +E + E+ KDLE + +++ K
Sbjct: 706 QNQKKEDSKTSTSVTSVNQASTSRLEGLQSENHHLRMKITELDKDLEEVTMQLQDTPEKT 765
Query: 391 SSQYPEAYKE 420
+ Y+E
Sbjct: 766 TYIKQNHYQE 775
>BC101470-1|AAI01471.1| 1478|Homo sapiens FYVE and coiled-coil domain
containing 1 protein.
Length = 1478
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 334 MRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPSEEKPESKMV 510
+R+DLE K++ TK+ Y + +E ++K L D +DL +++ E +++
Sbjct: 1084 LREDLERTQKELEKATTKIQEYYNKLCQEVTNRERNDQKMLADLDDLNRTKKYLEERLI 1142
>BC101468-1|AAI01469.1| 1478|Homo sapiens FYVE and coiled-coil domain
containing 1 protein.
Length = 1478
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 334 MRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPSEEKPESKMV 510
+R+DLE K++ TK+ Y + +E ++K L D +DL +++ E +++
Sbjct: 1084 LREDLERTQKELEKATTKIQEYYNKLCQEVTNRERNDQKMLADLDDLNRTKKYLEERLI 1142
>AL833308-1|CAD89924.1| 878|Homo sapiens hypothetical protein
protein.
Length = 878
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 334 MRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPSEEKPESKMV 510
+R+DLE K++ TK+ Y + +E ++K L D +DL +++ E +++
Sbjct: 484 LREDLERTQKELEKATTKIQEYYNKLCQEVTNRERNDQKMLADLDDLNRTKKYLEERLI 542
>AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil domain
containing 1 protein.
Length = 1478
Score = 30.7 bits (66), Expect = 4.5
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 334 MRKDLEFIFKKIRAIKTKLSSQYPEAYKEAVAESLANRKPLVDDEDLKPSEEKPESKMV 510
+R+DLE K++ TK+ Y + +E ++K L D +DL +++ E +++
Sbjct: 1084 LREDLERTQKELEKATTKIQEYYNKLCQEVTNRERNDQKMLADLDDLNRTKKYLEERLI 1142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,698,159
Number of Sequences: 237096
Number of extensions: 1655262
Number of successful extensions: 3738
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3736
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -