Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28d12
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   3.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.9  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   6.5  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 508 VANIGWCPFYQNKEMSV 558
           VA + +C FYQNK + V
Sbjct: 91  VATVFFCLFYQNKLIEV 107


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 501 IYRSCVNLSPSIINTWLQTF 442
           + R+  N+   I+NTW+  F
Sbjct: 295 VTRTGANIKKLIVNTWISLF 314


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 240 RNKHFITRHKIQLTVWHSSRSQVKNDLSNL*R 145
           +N   ITR     T+WH ++ ++   L ++ R
Sbjct: 555 KNSDHITRIYACATMWHENKEEMMEFLKSILR 586


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 240 RNKHFITRHKIQLTVWHSSRSQVKNDLSNL*R 145
           +N   ITR     T+WH ++ ++   L ++ R
Sbjct: 555 KNSDHITRIYACATMWHENKEEMMEFLKSILR 586


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 240 RNKHFITRHKIQLTVWHSSRSQVKNDLSNL*R 145
           +N   ITR     T+WH ++ ++   L ++ R
Sbjct: 555 KNSDHITRIYACATMWHENKEEMMEFLKSILR 586


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 240 RNKHFITRHKIQLTVWHSSRSQVKNDLSNL*R 145
           +N   ITR     T+WH ++ ++   L ++ R
Sbjct: 555 KNSDHITRIYACATMWHENKEEMMEFLKSILR 586


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 380 PLPKPLTTSPSRKKGR 333
           P PKP  T  SR+K R
Sbjct: 251 PTPKPRPTKVSRRKPR 266


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -3

Query: 401 GHPSSLEPLPK 369
           G+P+S++PLP+
Sbjct: 23  GYPASVQPLPR 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,735
Number of Sequences: 336
Number of extensions: 3503
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)