Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28d12
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071393-1|AAL49015.1|  153|Drosophila melanogaster RE45482p pro...   161   7e-40
AF017096-2|AAC39087.1|  153|Drosophila melanogaster protein ( Dr...   161   7e-40
AE014297-670|AAF54164.1|  153|Drosophila melanogaster CG2846-PA ...   161   7e-40
AY060898-1|AAL28446.1|  153|Drosophila melanogaster GM04958p pro...   160   1e-39

>AY071393-1|AAL49015.1|  153|Drosophila melanogaster RE45482p
           protein.
          Length = 153

 Score =  161 bits (391), Expect = 7e-40
 Identities = 70/104 (67%), Positives = 82/104 (78%)
 Frame = +1

Query: 322 MSSVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVY 501
           M S LP F  GE+V+GFGRGSKELG PTAN+PLEVVKSLP+ L  G YYGWA VD GPV+
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVH 60

Query: 502 EMVANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYL 633
           +MV +IGW PFY NKE SVETH++H+F  D YG  LKI ++GYL
Sbjct: 61  KMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYL 104


>AF017096-2|AAC39087.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterprophosphoribosylamidotransferase
           (Prat) gene, completecds. ).
          Length = 153

 Score =  161 bits (391), Expect = 7e-40
 Identities = 70/104 (67%), Positives = 82/104 (78%)
 Frame = +1

Query: 322 MSSVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVY 501
           M S LP F  GE+V+GFGRGSKELG PTAN+PLEVVKSLP+ L  G YYGWA VD GPV+
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVH 60

Query: 502 EMVANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYL 633
           +MV +IGW PFY NKE SVETH++H+F  D YG  LKI ++GYL
Sbjct: 61  KMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYL 104


>AE014297-670|AAF54164.1|  153|Drosophila melanogaster CG2846-PA
           protein.
          Length = 153

 Score =  161 bits (391), Expect = 7e-40
 Identities = 70/104 (67%), Positives = 82/104 (78%)
 Frame = +1

Query: 322 MSSVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVY 501
           M S LP F  GE+V+GFGRGSKELG PTAN+PLEVVKSLP+ L  G YYGWA VD GPV+
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVH 60

Query: 502 EMVANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYL 633
           +MV +IGW PFY NKE SVETH++H+F  D YG  LKI ++GYL
Sbjct: 61  KMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYL 104


>AY060898-1|AAL28446.1|  153|Drosophila melanogaster GM04958p
           protein.
          Length = 153

 Score =  160 bits (389), Expect = 1e-39
 Identities = 69/104 (66%), Positives = 82/104 (78%)
 Frame = +1

Query: 322 MSSVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVY 501
           M S LP F  GE+V+GFGRGSKE+G PTAN+PLEVVKSLP+ L  G YYGWA VD GPV+
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKEMGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVH 60

Query: 502 EMVANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYL 633
           +MV +IGW PFY NKE SVETH++H+F  D YG  LKI ++GYL
Sbjct: 61  KMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYL 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,225,944
Number of Sequences: 53049
Number of extensions: 539803
Number of successful extensions: 1292
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)