Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d12
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70686-5|CAA94613.1| 135|Caenorhabditis elegans Hypothetical pr... 113 1e-25
Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical pr... 31 0.91
U64857-4|AAN84850.1| 356|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical ... 30 1.2
AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical ... 30 1.2
Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical pr... 29 2.1
U50311-7|AAA92311.1| 401|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 27 8.4
U80029-19|AAB37598.1| 139|Caenorhabditis elegans Hypothetical p... 27 8.4
AF106577-14|AAC78187.1| 68|Caenorhabditis elegans Hypothetical... 27 8.4
>Z70686-5|CAA94613.1| 135|Caenorhabditis elegans Hypothetical
protein R10H10.6 protein.
Length = 135
Score = 113 bits (272), Expect = 1e-25
Identities = 52/102 (50%), Positives = 70/102 (68%)
Frame = +1
Query: 328 SVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYEM 507
++LP+ GEVV+GFGRG KELGCPTAN VV LP+GL GVY+G A++D G Y+M
Sbjct: 2 NLLPYQFVGEVVRGFGRGGKELGCPTANMDGTVVNGLPEGLPVGVYFGTAKLD-GKSYKM 60
Query: 508 VANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYL 633
+IGW P YQN++ +VE H++ DFYG L +IG++
Sbjct: 61 AMSIGWNPQYQNEKKTVELHLIDYSGSDFYGKTLSAVIIGFI 102
>Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical
protein T11G6.2b protein.
Length = 495
Score = 30.7 bits (66), Expect = 0.91
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 552 HLFILVKRTPSYICYHLIYRSCVNLSPSIINTWL 451
H+FI V SY H ++ + PS+I+TW+
Sbjct: 28 HVFIFVHTFMSYAMLHATRKTLSTVKPSLIHTWI 61
>Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical
protein T11G6.2a protein.
Length = 502
Score = 30.7 bits (66), Expect = 0.91
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 552 HLFILVKRTPSYICYHLIYRSCVNLSPSIINTWL 451
H+FI V SY H ++ + PS+I+TW+
Sbjct: 35 HVFIFVHTFMSYAMLHATRKTLSTVKPSLIHTWI 68
>U64857-4|AAN84850.1| 356|Caenorhabditis elegans Hypothetical
protein C37C3.7 protein.
Length = 356
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 231 VYCVSFS*LVHSFTSK*KKESHENIFSIEENVIS 332
+YC+ FS L+ F S K +S ++ ++EN++S
Sbjct: 1 MYCLQFSTLLFLFLSTTKAQSRDDSLDLDENILS 34
>AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical
protein F18A12.8b protein.
Length = 816
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 496 VYEMVANIGWCPFYQNKEMSVETHIMHN 579
+Y ++ + W PF+Q+ S TH+ HN
Sbjct: 411 LYNLLPQVDWVPFFQSIAPSDLTHLFHN 438
>AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical
protein F18A12.8a protein.
Length = 848
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 496 VYEMVANIGWCPFYQNKEMSVETHIMHN 579
+Y ++ + W PF+Q+ S TH+ HN
Sbjct: 411 LYNLLPQVDWVPFFQSIAPSDLTHLFHN 438
>Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical
protein K02E11.7 protein.
Length = 135
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 152 YNDNLKVIKIHRLIITNYKPYHSHNLETTHKVNKRFL 42
YN N K + I +++ T++ Y++ N + KVN FL
Sbjct: 97 YNKNKKALIIKQILKTDFGMYYTGNKKFEQKVNSLFL 133
>U50311-7|AAA92311.1| 401|Caenorhabditis elegans Hypothetical
protein C25E10.1 protein.
Length = 401
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 95 ACNXXXXXXXXXXXXNYRYKLLKSFLTCDLDECHTVSCILCLVMKCL 235
AC N Y+ LK + C+L++ SC C KCL
Sbjct: 22 ACRACAAFFRRFVVLNLEYECLKDEIKCNLNKIRRSSCRHCRFQKCL 68
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
E01G6.1 protein.
Length = 1391
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 340 FFLEGEVVKGFGRGSKELGCPTANYPL 420
F + G V GFG + + GCP + PL
Sbjct: 1103 FNMGGGAVPGFGNQASQSGCPLGSRPL 1129
>U80029-19|AAB37598.1| 139|Caenorhabditis elegans Hypothetical
protein T20D4.19 protein.
Length = 139
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 295 MKIFFQLRKMSSVLPFFLEGEVVKGFGRGSKELGCPTAN 411
MK+F +S+VLP EG V R K+ C TA+
Sbjct: 1 MKLFLLFITISTVLPSLAEGACVCPATRKVKDSNCTTAD 39
>AF106577-14|AAC78187.1| 68|Caenorhabditis elegans Hypothetical
protein F46F5.8 protein.
Length = 68
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 406 ANYPLEVVKSLPKGLEP 456
ANYP VV S PKGL P
Sbjct: 35 ANYPRAVVDSHPKGLRP 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,056,981
Number of Sequences: 27780
Number of extensions: 299629
Number of successful extensions: 678
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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