Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d11
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC039582-1|AAH39582.1| 593|Homo sapiens DNAI2 protein protein. 140 3e-33
AF253097-1|AAG38000.1| 605|Homo sapiens dynein axonemal interme... 140 3e-33
AF250288-1|AAG38489.1| 605|Homo sapiens dynein axonemal interme... 140 3e-33
AJ295276-1|CAC17464.1| 605|Homo sapiens intermediate dynein cha... 140 4e-33
EF063608-1|ABN79919.1| 139|Homo sapiens heparan sulfate 3-O-sul... 34 0.56
EF063607-1|ABN79918.1| 139|Homo sapiens heparan sulfate 3-O-sul... 34 0.56
EF063606-1|ABN79917.1| 139|Homo sapiens heparan sulfate 3-O-sul... 34 0.56
EF063605-1|ABN79916.1| 139|Homo sapiens heparan sulfate 3-O-sul... 34 0.56
EF063604-1|ABN79915.1| 139|Homo sapiens heparan sulfate 3-O-sul... 34 0.56
EF063603-1|ABN79914.1| 139|Homo sapiens heparan sulfate 3-O-sul... 34 0.56
EF063602-1|ABN79913.1| 139|Homo sapiens heparan sulfate 3-O-sul... 34 0.56
EF063601-1|ABN79912.1| 139|Homo sapiens heparan sulfate 3-O-sul... 34 0.56
AL834283-1|CAD38957.1| 335|Homo sapiens hypothetical protein pr... 34 0.56
AF105378-1|AAD30210.2| 456|Homo sapiens heparan sulfate 3-O-sul... 34 0.56
>BC039582-1|AAH39582.1| 593|Homo sapiens DNAI2 protein protein.
Length = 593
Score = 140 bits (340), Expect = 3e-33
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 7/205 (3%)
Frame = +2
Query: 89 YGYTKLRKNFGRQTLFQKVPAHIVDSIIPNKDEQKQYMLRNPVHRLVQSTMAQSENETNT 268
Y Y K R FG+Q F A + I+PN + +Q++ RNPV +Q +++ SE+E N+
Sbjct: 5 YVYVKKRSEFGKQCNFSDRQAELNIDIMPNPELAEQFVERNPVDTGIQCSISMSEHEANS 64
Query: 269 EPVVVHEQGINHTEGGWPREVHIYNEDHVNRHRRRVMHDDNYVHTVLNLAPVMNHYLDQN 448
E + +G+NH EGGWP++V+ + R R++V D+NYV+ ++ L +M H + QN
Sbjct: 65 ERFEMETRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYVNAIMQLGSIMEHCIKQN 124
Query: 449 NAIELYQAYFCDMESQKPVEK-YDVKIANVFRDPS--SRPISCIQWTNEKKPKLVVAYS- 616
NAI++Y+ YF D E+ + +E+ K NVFRDP R + + W + KL VAYS
Sbjct: 125 NAIDIYEEYFNDEEAMEVMEEDPSAKTINVFRDPQEIKRAATHLSWHPDGNRKLAVAYSC 184
Query: 617 ---NPRTTHENNSCFFWDLNRQTIP 682
++ + WDL P
Sbjct: 185 LDFQRAPVGMSSDSYIWDLENPNKP 209
>AF253097-1|AAG38000.1| 605|Homo sapiens dynein axonemal
intermediate chain protein.
Length = 605
Score = 140 bits (340), Expect = 3e-33
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 7/205 (3%)
Frame = +2
Query: 89 YGYTKLRKNFGRQTLFQKVPAHIVDSIIPNKDEQKQYMLRNPVHRLVQSTMAQSENETNT 268
Y Y K R FG+Q F A + I+PN + +Q++ RNPV +Q +++ SE+E N+
Sbjct: 5 YVYVKKRSEFGKQCNFSDRQAELNIDIMPNPELAEQFVERNPVDTGIQCSISMSEHEANS 64
Query: 269 EPVVVHEQGINHTEGGWPREVHIYNEDHVNRHRRRVMHDDNYVHTVLNLAPVMNHYLDQN 448
E + +G+NH EGGWP++V+ + R R++V D+NYV+ ++ L +M H + QN
Sbjct: 65 ERFEMETRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYVNAIMQLGSIMEHCIKQN 124
Query: 449 NAIELYQAYFCDMESQKPVEK-YDVKIANVFRDPS--SRPISCIQWTNEKKPKLVVAYS- 616
NAI++Y+ YF D E+ + +E+ K NVFRDP R + + W + KL VAYS
Sbjct: 125 NAIDIYEEYFNDEEAMEVMEEDPSAKTINVFRDPQEIKRAATHLSWHPDGNRKLAVAYSC 184
Query: 617 ---NPRTTHENNSCFFWDLNRQTIP 682
++ + WDL P
Sbjct: 185 LDFQRAPVGMSSDSYIWDLENPNKP 209
>AF250288-1|AAG38489.1| 605|Homo sapiens dynein axonemal
intermediate chain protein.
Length = 605
Score = 140 bits (340), Expect = 3e-33
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 7/205 (3%)
Frame = +2
Query: 89 YGYTKLRKNFGRQTLFQKVPAHIVDSIIPNKDEQKQYMLRNPVHRLVQSTMAQSENETNT 268
Y Y K R FG+Q F A + I+PN + +Q++ RNPV +Q +++ SE+E N+
Sbjct: 5 YVYVKKRSEFGKQCNFSDRQAELNIDIMPNPELAEQFVERNPVDTGIQCSISMSEHEANS 64
Query: 269 EPVVVHEQGINHTEGGWPREVHIYNEDHVNRHRRRVMHDDNYVHTVLNLAPVMNHYLDQN 448
E + +G+NH EGGWP++V+ + R R++V D+NYV+ ++ L +M H + QN
Sbjct: 65 ERFEMETRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYVNAIMQLGSIMEHCIKQN 124
Query: 449 NAIELYQAYFCDMESQKPVEK-YDVKIANVFRDPS--SRPISCIQWTNEKKPKLVVAYS- 616
NAI++Y+ YF D E+ + +E+ K NVFRDP R + + W + KL VAYS
Sbjct: 125 NAIDIYEEYFNDEEAMEVMEEDPSAKTINVFRDPQEIKRAATHLSWHPDGNRKLAVAYSC 184
Query: 617 ---NPRTTHENNSCFFWDLNRQTIP 682
++ + WDL P
Sbjct: 185 LDFQRAPVGMSSDSYIWDLENPNKP 209
>AJ295276-1|CAC17464.1| 605|Homo sapiens intermediate dynein chain
protein.
Length = 605
Score = 140 bits (339), Expect = 4e-33
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 7/205 (3%)
Frame = +2
Query: 89 YGYTKLRKNFGRQTLFQKVPAHIVDSIIPNKDEQKQYMLRNPVHRLVQSTMAQSENETNT 268
Y Y K R FG+Q F A + I+PN + +Q++ RNPV +Q +++ SE+E N+
Sbjct: 5 YVYVKKRSEFGKQCNFSDRQAELNIDIMPNPELAEQFVERNPVDTGIQCSISMSEHEANS 64
Query: 269 EPVVVHEQGINHTEGGWPREVHIYNEDHVNRHRRRVMHDDNYVHTVLNLAPVMNHYLDQN 448
E + +G+NH EGGWP++V+ + R R++V D+NYV+ ++ L +M H + QN
Sbjct: 65 ERFEMKTRGVNHVEGGWPKDVNPLELEQTIRFRKKVEKDENYVNAIMQLGSIMEHCIKQN 124
Query: 449 NAIELYQAYFCDMESQKPVEK-YDVKIANVFRDPS--SRPISCIQWTNEKKPKLVVAYS- 616
NAI++Y+ YF D E+ + +E+ K NVFRDP R + + W + KL VAYS
Sbjct: 125 NAIDIYEEYFNDEEAMEVMEEDPSAKTINVFRDPQEIKRAATHLSWHPDGNRKLAVAYSC 184
Query: 617 ---NPRTTHENNSCFFWDLNRQTIP 682
++ + WDL P
Sbjct: 185 LDFQRAPVGMSSDSYIWDLENPNKP 209
>EF063608-1|ABN79919.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.56
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DDNYVHTVLNLAPVMNHYLDQNNAIELYQAYFCDMESQKPVEKY--DVKIANVFRDPSSR 556
D NY + VM LD +E +YF E+ K + D+K+ V R+P +R
Sbjct: 55 DRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTR 114
Query: 557 PISCIQWTNEKKPKL----VVAYSN 619
IS T KKP++ V+A+ N
Sbjct: 115 AISDYTQTLSKKPEIPTFEVLAFKN 139
>EF063607-1|ABN79918.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.56
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DDNYVHTVLNLAPVMNHYLDQNNAIELYQAYFCDMESQKPVEKY--DVKIANVFRDPSSR 556
D NY + VM LD +E +YF E+ K + D+K+ V R+P +R
Sbjct: 55 DRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTR 114
Query: 557 PISCIQWTNEKKPKL----VVAYSN 619
IS T KKP++ V+A+ N
Sbjct: 115 AISDYTQTLSKKPEIPTFEVLAFKN 139
>EF063606-1|ABN79917.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.56
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DDNYVHTVLNLAPVMNHYLDQNNAIELYQAYFCDMESQKPVEKY--DVKIANVFRDPSSR 556
D NY + VM LD +E +YF E+ K + D+K+ V R+P +R
Sbjct: 55 DRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTR 114
Query: 557 PISCIQWTNEKKPKL----VVAYSN 619
IS T KKP++ V+A+ N
Sbjct: 115 AISDYTQTLSKKPEIPTFEVLAFKN 139
>EF063605-1|ABN79916.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.56
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DDNYVHTVLNLAPVMNHYLDQNNAIELYQAYFCDMESQKPVEKY--DVKIANVFRDPSSR 556
D NY + VM LD +E +YF E+ K + D+K+ V R+P +R
Sbjct: 55 DRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTR 114
Query: 557 PISCIQWTNEKKPKL----VVAYSN 619
IS T KKP++ V+A+ N
Sbjct: 115 AISDYTQTLSKKPEIPTFEVLAFKN 139
>EF063604-1|ABN79915.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.56
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DDNYVHTVLNLAPVMNHYLDQNNAIELYQAYFCDMESQKPVEKY--DVKIANVFRDPSSR 556
D NY + VM LD +E +YF E+ K + D+K+ V R+P +R
Sbjct: 55 DRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTR 114
Query: 557 PISCIQWTNEKKPKL----VVAYSN 619
IS T KKP++ V+A+ N
Sbjct: 115 AISDYTQTLSKKPEIPTFEVLAFKN 139
>EF063603-1|ABN79914.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.56
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DDNYVHTVLNLAPVMNHYLDQNNAIELYQAYFCDMESQKPVEKY--DVKIANVFRDPSSR 556
D NY + VM LD +E +YF E+ K + D+K+ V R+P +R
Sbjct: 55 DRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTR 114
Query: 557 PISCIQWTNEKKPKL----VVAYSN 619
IS T KKP++ V+A+ N
Sbjct: 115 AISDYTQTLSKKPEIPTFEVLAFKN 139
>EF063602-1|ABN79913.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.56
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DDNYVHTVLNLAPVMNHYLDQNNAIELYQAYFCDMESQKPVEKY--DVKIANVFRDPSSR 556
D NY + VM LD +E +YF E+ K + D+K+ V R+P +R
Sbjct: 55 DRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTR 114
Query: 557 PISCIQWTNEKKPKL----VVAYSN 619
IS T KKP++ V+A+ N
Sbjct: 115 AISDYTQTLSKKPEIPTFEVLAFKN 139
>EF063601-1|ABN79912.1| 139|Homo sapiens heparan sulfate
3-O-sulfotransferase 4 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.56
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DDNYVHTVLNLAPVMNHYLDQNNAIELYQAYFCDMESQKPVEKY--DVKIANVFRDPSSR 556
D NY + VM LD +E +YF E+ K + D+K+ V R+P +R
Sbjct: 55 DRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTR 114
Query: 557 PISCIQWTNEKKPKL----VVAYSN 619
IS T KKP++ V+A+ N
Sbjct: 115 AISDYTQTLSKKPEIPTFEVLAFKN 139
>AL834283-1|CAD38957.1| 335|Homo sapiens hypothetical protein
protein.
Length = 335
Score = 33.9 bits (74), Expect = 0.56
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DDNYVHTVLNLAPVMNHYLDQNNAIELYQAYFCDMESQKPVEKY--DVKIANVFRDPSSR 556
D NY + VM LD +E +YF E+ K + D+K+ V R+P +R
Sbjct: 113 DRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTR 172
Query: 557 PISCIQWTNEKKPKL----VVAYSN 619
IS T KKP++ V+A+ N
Sbjct: 173 AISDYTQTLSKKPEIPTFEVLAFKN 197
>AF105378-1|AAD30210.2| 456|Homo sapiens heparan sulfate
3-O-sulfotransferase-4 protein.
Length = 456
Score = 33.9 bits (74), Expect = 0.56
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 DDNYVHTVLNLAPVMNHYLDQNNAIELYQAYFCDMESQKPVEKY--DVKIANVFRDPSSR 556
D NY + VM LD +E +YF E+ K + D+K+ V R+P +R
Sbjct: 234 DRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKLIVVVRNPVTR 293
Query: 557 PISCIQWTNEKKPKL----VVAYSN 619
IS T KKP++ V+A+ N
Sbjct: 294 AISDYTQTLSKKPEIPTFEVLAFKN 318
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,775,848
Number of Sequences: 237096
Number of extensions: 2119300
Number of successful extensions: 4501
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4500
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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