Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28d08
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.7  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    25   3.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   5.3  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 533 GVAPGGEFRRAYHEMQKIPGCKLYLGDRPIQITIARA 643
           G   GGEF+R+Y + ++I   KL    R   I +ARA
Sbjct: 387 GTDGGGEFQRSYDDEEEIDR-KLRQDHRRFTIRMARA 422


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = +1

Query: 208 IIVKRFYYERKVMYPSIYQNLLHFCKMINKPRSFFWVQCTSVNSLLKMFQRTLS 369
           II+ ++Y +    +   +    H   M+N   S ++V CT+  +  K F + L+
Sbjct: 217 IILSQYYLQPDFQFCHTFA-YYHIIAMLNGFCSLWFVNCTAFGTASKAFAKELT 269


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 238 KVMYPSIYQNLLHFCKMINKPRSFFWVQCTSVNSLLKMF 354
           KV    IY+NLLH C+    P    +V   S  + L  F
Sbjct: 628 KVFELVIYKNLLHACRSYLSPYQHGFVPKKSTTTNLVEF 666


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,095
Number of Sequences: 2352
Number of extensions: 14468
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)