Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d07
(691 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 30 0.016
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 26 0.25
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 26 0.25
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 26 0.25
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 26 0.25
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 26 0.25
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 26 0.25
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 26 0.25
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 26 0.25
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 1.0
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 22 4.1
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 7.2
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 9.5
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 9.5
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 9.5
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 9.5
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 9.5
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 30.3 bits (65), Expect = 0.016
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 221 YGSWCTPETSPIHHPLTQT-NSNIETKTQLQDQKRFLEANSTVFPLQKVRLFSTSPPP 391
YGSW P PI+ +T T + T+T L++ + ++ +P+Q+ + S SPPP
Sbjct: 232 YGSWFLPH-QPIYPAVTATVQLSTCTRTTLKNNR------ASPYPMQRPKSASLSPPP 282
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.25
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +2
Query: 452 NYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
+Y + PP P P+YPQ P A
Sbjct: 28 DYYNPNANSTYPPACYSPPQVAPQYPQHPYAA 59
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.25
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +2
Query: 452 NYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
+Y + PP P P+YPQ P A
Sbjct: 28 DYYNPNANSTYPPACYSPPQVAPQYPQHPYAA 59
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 26.2 bits (55), Expect = 0.25
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +2
Query: 452 NYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
+Y + PP P P+YPQ P A
Sbjct: 28 DYYNPNANSTYPPACYSPPQVAPQYPQHPYAA 59
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.25
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +2
Query: 452 NYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
+Y + PP P P+YPQ P A
Sbjct: 28 DYYNPNANSTYPPACYSPPQVAPQYPQHPYAA 59
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 26.2 bits (55), Expect = 0.25
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +2
Query: 452 NYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
+Y + PP P P+YPQ P A
Sbjct: 28 DYYNPNANSTYPPACYSPPQVAPQYPQHPYAA 59
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.25
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +2
Query: 452 NYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
+Y + PP P P+YPQ P A
Sbjct: 28 DYYNPNANSTYPPACYSPPQVAPQYPQHPYAA 59
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 26.2 bits (55), Expect = 0.25
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +2
Query: 452 NYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
+Y + PP P P+YPQ P A
Sbjct: 28 DYYNPNANSTYPPACYSPPQVAPQYPQHPYAA 59
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.25
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +2
Query: 452 NYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
+Y + PP P P+YPQ P A
Sbjct: 28 DYYNPNANSTYPPACYSPPQVAPQYPQHPYAA 59
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 24.2 bits (50), Expect = 1.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 482 KPPPIQEEPDCEPEYPQSPIPASPTRYTKCKGF 580
+PPP + D EP + P+ T YT + F
Sbjct: 89 RPPPDEPIDDYEPSFDLFYYPSRQTLYTPVQYF 121
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 500 EEPDCEPEYPQSPIPASPTRYTKCKGFL 583
E+P+ ++P P YT+ GFL
Sbjct: 1650 EKPENHGLNAKAPGPGQAGEYTRAAGFL 1677
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 22.2 bits (45), Expect = 4.1
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 428 LWPFYLLCSKYS 393
LWP ++ C++YS
Sbjct: 189 LWPAWVYCTRYS 200
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 161 PSTSDRDAKYGTKT 202
P T D D KYG T
Sbjct: 195 PLTDDHDEKYGVPT 208
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 9.5
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +2
Query: 140 MKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCT 238
M G S +DRD K P G + CT
Sbjct: 121 MGGTGTAGSQADRDGKNYPAVPYGSGDFHDSCT 153
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.0 bits (42), Expect = 9.5
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +2
Query: 140 MKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCT 238
M G S +DRD K P G + CT
Sbjct: 122 MGGTGTAGSQADRDGKNYPAVPYGSGDFHDSCT 154
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 9.5
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +2
Query: 140 MKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCT 238
M G S +DRD K P G + CT
Sbjct: 122 MGGTGTAGSQADRDGKNYPAVPYGSGDFHDSCT 154
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +1
Query: 508 GLRTGVSAESYTSLPDAVHEMQGIP 582
GLR G+ Y P QG+P
Sbjct: 55 GLRQGIPPHHYGGPPSGGQPPQGMP 79
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.0 bits (42), Expect = 9.5
Identities = 5/18 (27%), Positives = 14/18 (77%)
Frame = +2
Query: 2 FFFFFLYITRKLHILIMV 55
++F++ +I +H+L++V
Sbjct: 239 YYFYYAFILFTVHLLLLV 256
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,201
Number of Sequences: 336
Number of extensions: 4027
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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