Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d07
(691 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 36 0.030
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 32 0.49
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 32 0.49
11_06_0610 - 25449085-25453284 31 0.65
04_04_0658 + 27006245-27006305,27006447-27006523,27006798-270072... 30 1.5
05_06_0133 + 25905455-25905545,25905650-25906202,25906310-259068... 30 2.0
03_03_0106 - 14500935-14501263,14501357-14501432,14501531-14501542 29 3.5
02_05_0227 - 26994462-26994591,26994714-26994803,26994895-269950... 29 3.5
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 29 4.6
10_07_0172 + 13804803-13805293,13805423-13805537,13805766-138058... 29 4.6
11_04_0365 - 16818468-16818514,16818619-16821706,16822860-168229... 28 8.0
03_03_0145 + 14833043-14833113,14833544-14833662,14833834-148339... 28 8.0
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 28 8.0
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 35.9 bits (79), Expect = 0.030
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 479 DKPPPIQEEPDCEPEYPQSPIPASPTRYTKCK 574
+KP P ++ P C+PE P P P P +CK
Sbjct: 132 EKPKPCEKPPPCKPEEPPKPPPEKPPPKPECK 163
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 485 PPPI-QEEPDCEPEYPQSPIPASP 553
PPP+ + P C+P P SP PA+P
Sbjct: 1146 PPPLPSDSPPCQPPLPPSPPPATP 1169
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 479 DKPPPIQEEPDCEPEYPQSPIPASP 553
+KPPP+Q+ P P PQ P SP
Sbjct: 67 EKPPPLQKAPKVSPPPPQKPDKVSP 91
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 470 TSGDKPPPIQEEPDCEPEYP-QSPIPASP 553
TS PPP +E P+ PE P SP P+SP
Sbjct: 456 TSHGPPPPEEESPEEPPEEPTPSPTPSSP 484
>04_04_0658 +
27006245-27006305,27006447-27006523,27006798-27007225,
27007614-27007882,27007966-27008249
Length = 372
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 581 LLSTFCDPYMPIDPQGRLYIGW 646
L S F D Y P+DP G + I W
Sbjct: 15 LSSRFADAYDPVDPNGNIIINW 36
>05_06_0133 +
25905455-25905545,25905650-25906202,25906310-25906806,
25906905-25907043,25907182-25907253,25907344-25907415,
25907503-25907583,25907899-25908065,25908148-25908416,
25908512-25908638,25908752-25908820,25908928-25909120,
25909215-25909707
Length = 940
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 332 ANSTVFPL-QKVRLFSTSPPPDYISSIEDKKAITELKELKKNYITKTTSGDKPPP 493
ANST+ PL V +FS P + ED AIT +KE K + K GD P
Sbjct: 352 ANSTLPPLINAVEVFSVIPTATIGTDPEDVAAITAIKE--KYQVVKNWMGDPCVP 404
>03_03_0106 - 14500935-14501263,14501357-14501432,14501531-14501542
Length = 138
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +2
Query: 398 ISSIEDKKAITELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIPASPTRYTKCKG 577
+ ++ + + EL++ K + +K P ++PD P+ P P P P C G
Sbjct: 46 VGEVDVVQVVGELRKAKFAAEVVSVEPEKKPEAPKKPDDPPKKPDPPPPCPPPPPPCCPG 105
>02_05_0227 -
26994462-26994591,26994714-26994803,26994895-26995022,
26995179-26995573,26995666-26995792,26995909-26995986,
26996096-26996198,26996315-26996589,26996700-26996726
Length = 450
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 2/131 (1%)
Frame = +2
Query: 143 KGHTVHPSTSDRDAKYGTKTPLARGPYGSWCTPETSPIHHPLTQT--NSNIETKTQLQDQ 316
K +T+ R + + PLA+ +GS+ P + + + +S I+ K +
Sbjct: 76 KNQAQQGATAGRASCSSSVQPLAKDRFGSFFGPSRPSLARRVIEEGCSSIIKEKQNVPSN 135
Query: 317 KRFLEANSTVFPLQKVRLFSTSPPPDYISSIEDKKAITELKELKKNYITKTTSGDKPPPI 496
K + + S P+ P ++ E+K+ + L++ + + D P
Sbjct: 136 KSSVSSASKKQPIPS----GQQQKPKFVK--EEKRKVDALRQNRDYSCLFSDDADTPQAT 189
Query: 497 QEEPDCEPEYP 529
+E+PD P P
Sbjct: 190 KEQPDNMPVLP 200
>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 152 TVHPSTSDRDAKYGTKTPLARG--PYGSWCTPETSPIHHPLTQTNSNIETKTQLQDQ 316
T++P R + PL P+G W + E PI HP + I ++ L ++
Sbjct: 3031 TLNPGEVVRVQNVDPRNPLYLSLVPHGGWTSHEPVPISHPTVAPSKFINLRSSLSER 3087
>10_07_0172 +
13804803-13805293,13805423-13805537,13805766-13805831,
13805921-13806009,13806103-13806193,13806312-13806458,
13806575-13806667,13806745-13806846,13806957-13807541,
13808523-13808813,13808866-13808937
Length = 713
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 155 VHPSTSDRDAKYGTKTPLARGPYGSWCTPETSPIHHPLTQTNSNIETKT 301
++PS + DA++ K+ +R C P+ +TQ + ETKT
Sbjct: 399 LNPSEGEDDAEFSLKSSHSRQDLTELCEPDMQEHEEQVTQHHGADETKT 447
>11_04_0365 - 16818468-16818514,16818619-16821706,16822860-16822919,
16823595-16823954
Length = 1184
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 374 RKV*LSAAGRQYCSLLETVSDLEAEFLFRCSSL 276
RK+ LS A QYC L ++ LE ++RC L
Sbjct: 1117 RKILLSCANLQYCDGLSGLTFLEEIKIWRCPKL 1149
>03_03_0145 +
14833043-14833113,14833544-14833662,14833834-14833991,
14834147-14834587
Length = 262
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/94 (25%), Positives = 41/94 (43%)
Frame = +2
Query: 194 TKTPLARGPYGSWCTPETSPIHHPLTQTNSNIETKTQLQDQKRFLEANSTVFPLQKVRLF 373
T +PL P P P+ P T S + Q Q +E ++ PL+ ++LF
Sbjct: 157 TGSPLPVPPSPGTVFPSQQPMQ-PSPMTTSTVFPLQQPLPQPTVIEPSARQ-PLE-LKLF 213
Query: 374 STSPPPDYISSIEDKKAITELKELKKNYITKTTS 475
+PP + ED++A + + Y T+ +S
Sbjct: 214 LEAPPAEDPEPSEDQEAPNNVARPQPRYPTEASS 247
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 27.9 bits (59), Expect = 8.0
Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 1/134 (0%)
Frame = +2
Query: 119 VFDGLKLMKGHTVHPSTSDRDAKYGTKTPLARG-PYGSWCTPETSPIHHPLTQTNSNIET 295
V + + + T D + G K LAR W E + P TQ + +ET
Sbjct: 4364 VIESFSVSDAELISIETLDCEQSEGVK--LARDFSKSDWMIIEAKEYNEPSTQMDVEVET 4421
Query: 296 KTQLQDQKRFLEANSTVFPLQKVRLFSTSPPPDYISSIEDKKAITELKELKKNYITKTTS 475
L+D+ F + ++R + + I +DK + +++ KN +T
Sbjct: 4422 -VDLEDE---------TFHVGELRASKSEHDNETIIEEDDKLILADVESSVKNVTLETLE 4471
Query: 476 GDKPPPIQEEPDCE 517
+K +++E + E
Sbjct: 4472 TEKNTMLEDEEEME 4485
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,237,648
Number of Sequences: 37544
Number of extensions: 417381
Number of successful extensions: 1499
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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