Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28d07
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 35 0.048
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 35 0.048
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 35 0.048
Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical pr... 33 0.19
AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical... 33 0.19
AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical... 33 0.19
AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical ... 33 0.19
AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical ... 33 0.19
AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induc... 33 0.19
L11247-8|AAY86263.1| 196|Caenorhabditis elegans Hypothetical pr... 33 0.25
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 32 0.44
Z81453-2|CAB03793.1| 177|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical pr... 31 0.59
AF067619-5|AAC17565.2| 317|Caenorhabditis elegans Hypothetical ... 31 0.59
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 31 0.59
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z54236-6|CAA90981.3| 465|Caenorhabditis elegans Hypothetical pr... 31 0.78
AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical ... 31 0.78
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 30 1.4
Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative tran... 30 1.8
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 29 2.4
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 29 2.4
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 29 2.4
AL032639-6|CAA21630.1| 405|Caenorhabditis elegans Hypothetical ... 29 2.4
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 29 2.4
AF053067-1|AAC35273.1| 405|Caenorhabditis elegans cyclin D prot... 29 2.4
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 29 3.1
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 29 3.1
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 29 3.1
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 29 4.1
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 29 4.1
AC087794-4|AAG53704.1| 275|Caenorhabditis elegans Hypothetical ... 28 5.5
Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical p... 28 7.2
Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical pr... 28 7.2
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 28 7.2
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 28 7.2
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 27 9.6
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 27 9.6
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 35.1 bits (77), Expect = 0.048
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 548 SPTRYT--KCKGFLLSTFCDPYMPIDPQGRLYIGWLCLVTFCYSYNAWGI 691
SPT T C GF L PY GR Y+ WL LVT C+ +NA+ I
Sbjct: 196 SPTVDTVKNCFGFSLKGTFHPY------GRFYMTWLSLVTLCFLFNAFCI 239
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 35.1 bits (77), Expect = 0.048
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 548 SPTRYT--KCKGFLLSTFCDPYMPIDPQGRLYIGWLCLVTFCYSYNAWGI 691
SPT T C GF L PY GR Y+ WL LVT C+ +NA+ I
Sbjct: 196 SPTVDTVKNCFGFSLKGTFHPY------GRFYMTWLSLVTLCFLFNAFCI 239
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 35.1 bits (77), Expect = 0.048
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 548 SPTRYT--KCKGFLLSTFCDPYMPIDPQGRLYIGWLCLVTFCYSYNAWGI 691
SPT T C GF L PY GR Y+ WL LVT C+ +NA+ I
Sbjct: 196 SPTVDTVKNCFGFSLKGTFHPY------GRFYMTWLSLVTLCFLFNAFCI 239
>Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 NLLSALYRAGSFXNTTKMVFDG-LKLMKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCTP 241
NL SALY++ SF +K+ G + M+G T+ +A T P G++ T
Sbjct: 180 NLKSALYKSVSFLVHSKVSTGGHVSFMQGITIPAGQGTTNANASAMTKYTESPMGAFTTR 239
Query: 242 ETSPIHHPLTQTNSNIETKTQLQ 310
T + N K++L+
Sbjct: 240 HTCDMRITFVSDKFNYILKSELK 262
>Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 NLLSALYRAGSFXNTTKMVFDG-LKLMKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCTP 241
NL SALY++ SF +K+ G + M+G T+ +A T P G++ T
Sbjct: 180 NLKSALYKSVSFLVHSKVSTGGHVSFMQGITIPAGQGTTNANASAMTKYTESPMGAFTTR 239
Query: 242 ETSPIHHPLTQTNSNIETKTQLQ 310
T + N K++L+
Sbjct: 240 HTCDMRITFVSDKFNYILKSELK 262
>Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 NLLSALYRAGSFXNTTKMVFDG-LKLMKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCTP 241
NL SALY++ SF +K+ G + M+G T+ +A T P G++ T
Sbjct: 284 NLKSALYKSVSFLVHSKVSTGGHVSFMQGITIPAGQGTTNANASAMTKYTESPMGAFTTR 343
Query: 242 ETSPIHHPLTQTNSNIETKTQLQ 310
T + N K++L+
Sbjct: 344 HTCDMRITFVSDKFNYILKSELK 366
>Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 NLLSALYRAGSFXNTTKMVFDG-LKLMKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCTP 241
NL SALY++ SF +K+ G + M+G T+ +A T P G++ T
Sbjct: 284 NLKSALYKSVSFLVHSKVSTGGHVSFMQGITIPAGQGTTNANASAMTKYTESPMGAFTTR 343
Query: 242 ETSPIHHPLTQTNSNIETKTQLQ 310
T + N K++L+
Sbjct: 344 HTCDMRITFVSDKFNYILKSELK 366
>AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 NLLSALYRAGSFXNTTKMVFDG-LKLMKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCTP 241
NL SALY++ SF +K+ G + M+G T+ +A T P G++ T
Sbjct: 180 NLKSALYKSVSFLVHSKVSTGGHVSFMQGITIPAGQGTTNANASAMTKYTESPMGAFTTR 239
Query: 242 ETSPIHHPLTQTNSNIETKTQLQ 310
T + N K++L+
Sbjct: 240 HTCDMRITFVSDKFNYILKSELK 262
>AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 NLLSALYRAGSFXNTTKMVFDG-LKLMKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCTP 241
NL SALY++ SF +K+ G + M+G T+ +A T P G++ T
Sbjct: 180 NLKSALYKSVSFLVHSKVSTGGHVSFMQGITIPAGQGTTNANASAMTKYTESPMGAFTTR 239
Query: 242 ETSPIHHPLTQTNSNIETKTQLQ 310
T + N K++L+
Sbjct: 240 HTCDMRITFVSDKFNYILKSELK 262
>AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 NLLSALYRAGSFXNTTKMVFDG-LKLMKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCTP 241
NL SALY++ SF +K+ G + M+G T+ +A T P G++ T
Sbjct: 284 NLKSALYKSVSFLVHSKVSTGGHVSFMQGITIPAGQGTTNANASAMTKYTESPMGAFTTR 343
Query: 242 ETSPIHHPLTQTNSNIETKTQLQ 310
T + N K++L+
Sbjct: 344 HTCDMRITFVSDKFNYILKSELK 366
>AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 NLLSALYRAGSFXNTTKMVFDG-LKLMKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCTP 241
NL SALY++ SF +K+ G + M+G T+ +A T P G++ T
Sbjct: 284 NLKSALYKSVSFLVHSKVSTGGHVSFMQGITIPAGQGTTNANASAMTKYTESPMGAFTTR 343
Query: 242 ETSPIHHPLTQTNSNIETKTQLQ 310
T + N K++L+
Sbjct: 344 HTCDMRITFVSDKFNYILKSELK 366
>AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induced
factor 1 protein.
Length = 719
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 NLLSALYRAGSFXNTTKMVFDG-LKLMKGHTVHPSTSDRDAKYGTKTPLARGPYGSWCTP 241
NL SALY++ SF +K+ G + M+G T+ +A T P G++ T
Sbjct: 180 NLKSALYKSVSFLVHSKVSTGGHVSFMQGITIPAGQGTTNANASAMTKYTESPMGAFTTR 239
Query: 242 ETSPIHHPLTQTNSNIETKTQLQ 310
T + N K++L+
Sbjct: 240 HTCDMRITFVSDKFNYILKSELK 262
>L11247-8|AAY86263.1| 196|Caenorhabditis elegans Hypothetical
protein F09G8.10 protein.
Length = 196
Score = 32.7 bits (71), Expect = 0.25
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 176 RDAKYGTKTPLARGPYGSWCTPETSPIHHPLTQTNSNIETKTQLQDQKRFLEANSTVFPL 355
+ ++ GT T RGP G SP+ P T+T TK L+ +K+ F L
Sbjct: 79 KSSELGTLTDFDRGPIGDNYRRTPSPVRKPTTET-----TKEDLEPEKK------VKFAL 127
Query: 356 QKVRLFSTSPPP 391
L ++SPPP
Sbjct: 128 PSPELPASSPPP 139
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 383 PPPDYISSIEDKKAITELKELKKNYITKTTSGDKPPPIQEEPD-CEPEYPQSPIPASPT 556
PPP + I + + + +KK+ KTTS PPP QE P C P+ P S +S T
Sbjct: 1625 PPPSVVHEIVHQ-VNADRQSMKKH--NKTTS---PPPAQEAPPTCAPDDPMSSSSSSST 1677
>Z81453-2|CAB03793.1| 177|Caenorhabditis elegans Hypothetical
protein B0250.2 protein.
Length = 177
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
Frame = +2
Query: 449 KNYITKTTSGDKPPPIQEEP-------DCEPEYPQSPIPASPTRYTK 568
KN T+ G PPP E+ +C P P+P+SP RY +
Sbjct: 100 KNNSTEFPCGTSPPPSYEDDVLEEYYKECHPSRRSIPVPSSPRRYIR 146
>Z77666-3|CAB01225.1| 698|Caenorhabditis elegans Hypothetical
protein K08E7.3 protein.
Length = 698
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 488 PPIQEEP-DCEPEYPQSPIPASPTRY 562
PPI+E P D +PQ P+PA P+RY
Sbjct: 273 PPIREAPKDVVFMHPQGPLPAVPSRY 298
>AF067619-5|AAC17565.2| 317|Caenorhabditis elegans Hypothetical
protein K03E5.1 protein.
Length = 317
Score = 31.5 bits (68), Expect = 0.59
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 392 DYISSIEDKKAITELKELKKNYITKTTSGDKPPPIQE 502
D ++ E K + + +L++NY+T +T+G PP +
Sbjct: 25 DIMNGQEKKPTLRAILKLRRNYVTHSTTGSPPPQFDQ 61
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 383 PPPDYISSIEDKKAITELKELKKNYITKT 469
PPP+ S E+ +AI +L+E+ +NY T+T
Sbjct: 442 PPPEDDSDSEEDEAIVKLREIIRNYGTRT 470
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical protein
ZC434.5 protein.
Length = 1149
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = +2
Query: 404 SIEDKKAITELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
S E K AI +L ELKKNY T S KP P P P P P+
Sbjct: 966 SQETKDAIAKLLELKKNYKEVTGSDYKPGP---APAAAPAKVTVPAPS 1010
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 404 SIEDKKAITELKELKKNYITKTTSGDKPPPIQ 499
S E K AI +L +LKK Y T S KP P Q
Sbjct: 1038 SQETKDAIAKLLQLKKQYKDATGSDYKPAPAQ 1069
>Z54236-6|CAA90981.3| 465|Caenorhabditis elegans Hypothetical
protein C27B7.6 protein.
Length = 465
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 404 SIEDKKAITELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIPASPTRYTK 568
S++DK + L+ ++K + TTS PPP PD P PIP SP T+
Sbjct: 413 SLKDK--VMSLESIRKK-LGMTTSTTPPPPRTPSPDA-PLAQSPPIPRSPPSSTE 463
>AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical
protein F33E11.2 protein.
Length = 366
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +2
Query: 452 NYITKTTSGDKP-PPIQEEPDCEPEYPQSPIPASPTRYTKCKGFLLSTFCDPYMPIDPQG 628
N IT T + P P + P P P+P P R K L F D Y P+ G
Sbjct: 217 NTITVTVAAAAPIPNLVPRGILAPPPPPPPLPLPPVRRRAPKVLNLQKFIDAYQPVQSTG 276
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +2
Query: 377 TSPPPDYISSIEDKKAITELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIPASP 553
T PP + + +TEL E P P++E EP Q+P+P+ P
Sbjct: 323 TVPPAVITTETTPAEVVTELLETTTAPAPAEALTAAPAPVKEPATPEPTKTQAPVPSEP 381
>Z99278-5|CAB16489.1| 290|Caenorhabditis elegans Hypothetical
protein Y53C12B.5a protein.
Length = 290
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 392 DYISSIEDKKAITELKELKKNYITK--TTSGDKPPPIQEEPDC 514
D +S I + KA+ EL E +KNY + G+ P +PDC
Sbjct: 5 DPVSEICEAKAVDELAEQEKNYYCQRCLNHGELKPRKGHKPDC 47
>AF022388-1|AAC38956.1| 290|Caenorhabditis elegans putative
transcription factor MAB-3 protein.
Length = 290
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 392 DYISSIEDKKAITELKELKKNYITK--TTSGDKPPPIQEEPDC 514
D +S I + KA+ EL E +KNY + G+ P +PDC
Sbjct: 5 DPVSEICEAKAVDELAEQEKNYYCQRCLNHGELKPRKGHKPDC 47
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +2
Query: 299 TQLQDQKRFLEANSTVF----PLQKV-RLFSTSPPPDYISSIEDKKAITELKELKK 451
T++ DQK+ +A T+F L++V R+F +S P + ED+K + E+ LKK
Sbjct: 172 TKMYDQKK-KDAEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKK 226
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +2
Query: 299 TQLQDQKRFLEANSTVF----PLQKV-RLFSTSPPPDYISSIEDKKAITELKELKK 451
T++ DQK+ +A T+F L++V R+F +S P + ED+K + E+ LKK
Sbjct: 172 TKMYDQKK-KDAEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKK 226
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +2
Query: 299 TQLQDQKRFLEANSTVF----PLQKV-RLFSTSPPPDYISSIEDKKAITELKELKK 451
T++ DQK+ +A T+F L++V R+F +S P + ED+K + E+ LKK
Sbjct: 172 TKMYDQKK-KDAEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKK 226
>AL032639-6|CAA21630.1| 405|Caenorhabditis elegans Hypothetical
protein Y38F1A.5 protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +2
Query: 377 TSPPPDYISSIEDKKAITELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIPAS 550
T P P +S ++ +A ELKELK+ + PPP EEP + PIP S
Sbjct: 309 TEPTPSAPASTQEPEAFQELKELKEEPL------PTPPP--EEPAFQKLVLLEPIPLS 358
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +2
Query: 299 TQLQDQKRFLEANSTVF----PLQKV-RLFSTSPPPDYISSIEDKKAITELKELKK 451
T++ DQK+ +A T+F L++V R+F +S P + ED+K + E+ LKK
Sbjct: 172 TKMYDQKK-KDAEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKK 226
>AF053067-1|AAC35273.1| 405|Caenorhabditis elegans cyclin D
protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +2
Query: 377 TSPPPDYISSIEDKKAITELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIPAS 550
T P P +S ++ +A ELKELK+ + PPP EEP + PIP S
Sbjct: 309 TEPTPSAPASTQEPEAFQELKELKEEPL------PTPPP--EEPAFQKLVLLEPIPLS 358
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +2
Query: 263 PLTQTNSNIE---TKTQLQDQKRFLEANSTVFPLQKVRLFSTSPPPDYISSIEDKKAITE 433
P+T + IE + Q + LE + L+ + P + +SS +++ I E
Sbjct: 80 PMTTSMDGIEDLPANDEAQFEDTILEEDELPDQLESAE--NQEPRSELVSSGVEEEIIEE 137
Query: 434 --LKELKKN-YITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
++E++++ Y+ ++ D+P P +E+P E + P PA
Sbjct: 138 EDIEEIEESDYVEESAPADEPAPEEEKPQ-EEAPAEEPAPA 177
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +2
Query: 263 PLTQTNSNIE---TKTQLQDQKRFLEANSTVFPLQKVRLFSTSPPPDYISSIEDKKAITE 433
P+T + IE + Q + LE + L+ + P + +SS +++ I E
Sbjct: 80 PMTTSMDGIEDLPANDEAQFEDTILEEDELPDQLESAE--NQEPRSELVSSGVEEEIIEE 137
Query: 434 --LKELKKN-YITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
++E++++ Y+ ++ D+P P +E+P E + P PA
Sbjct: 138 EDIEEIEESDYVEESAPADEPAPEEEKPQ-EEAPAEEPAPA 177
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +2
Query: 263 PLTQTNSNIE---TKTQLQDQKRFLEANSTVFPLQKVRLFSTSPPPDYISSIEDKKAITE 433
P+T + IE + Q + LE + L+ + P + +SS +++ I E
Sbjct: 80 PMTTSMDGIEDLPANDEAQFEDTILEEDELPDQLESAE--NQEPRSELVSSGVEEEIIEE 137
Query: 434 --LKELKKN-YITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
++E++++ Y+ ++ D+P P +E+P E + P PA
Sbjct: 138 EDIEEIEESDYVEESAPADEPAPEEEKPQ-EEAPAEEPAPA 177
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 28.7 bits (61), Expect = 4.1
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 4/135 (2%)
Frame = +2
Query: 161 PSTSDRDAKYGTKTPLARGPYGSWCTPETSPIHH--PLTQTNSNIETKTQLQ-DQKRFLE 331
P+ S+R TP G +G+ +P+ H P Q S Q +Q L
Sbjct: 357 PNQSERSTPGQPSTPGTPGSHGT--VGSNAPLSHQKPSQQQQSMHNHLPHHQYNQNNLLS 414
Query: 332 ANSTVFPLQKVRLFSTSPPPDYISSIEDK-KAITELKELKKNYITKTTSGDKPPPIQEEP 508
N L + +SP + + + ++T+ + + + T + PI+ P
Sbjct: 415 PNHGASSLGSQKQHGSSPMGSSLMPLNGQYPSMTQNMQSPASTSMEPTFKEPAVPIRHSP 474
Query: 509 DCEPEYPQSPIPASP 553
P + QSP+ SP
Sbjct: 475 SQMPTHLQSPVHPSP 489
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 28.7 bits (61), Expect = 4.1
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 4/135 (2%)
Frame = +2
Query: 161 PSTSDRDAKYGTKTPLARGPYGSWCTPETSPIHH--PLTQTNSNIETKTQLQ-DQKRFLE 331
P+ S+R TP G +G+ +P+ H P Q S Q +Q L
Sbjct: 357 PNQSERSTPGQPSTPGTPGSHGT--VGSNAPLSHQKPSQQQQSMHNHLPHHQYNQNNLLS 414
Query: 332 ANSTVFPLQKVRLFSTSPPPDYISSIEDK-KAITELKELKKNYITKTTSGDKPPPIQEEP 508
N L + +SP + + + ++T+ + + + T + PI+ P
Sbjct: 415 PNHGASSLGSQKQHGSSPMGSSLMPLNGQYPSMTQNMQSPASTSMEPTFKEPAVPIRHSP 474
Query: 509 DCEPEYPQSPIPASP 553
P + QSP+ SP
Sbjct: 475 SQMPTHLQSPVHPSP 489
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 6/27 (22%)
Frame = +2
Query: 482 KPPPIQEEPD------CEPEYPQSPIP 544
KP PI+EEP C P+ P SP+P
Sbjct: 632 KPTPIKEEPSAPYSDFCPPQTPSSPLP 658
>AC087794-4|AAG53704.1| 275|Caenorhabditis elegans Hypothetical
protein Y32G9A.5 protein.
Length = 275
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 374 STSPPPDYISSIEDKKAITELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIP 544
STS P Y+ S + ++ + NY ++ D PP +PE+P SP+P
Sbjct: 221 STSDEPQYLGSSQYPLG-SDAPQYPGNYNAFASTFD--PPYVAGNSKQPEFPSSPVP 274
>Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical
protein C01H6.7b protein.
Length = 582
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/53 (22%), Positives = 23/53 (43%)
Frame = +2
Query: 425 ITELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIPASPTRYTKCKGFL 583
+T+ KK + + + D + EP+ + E P+ P P P + +L
Sbjct: 98 LTDYHLKKKKILARKAARDAEKEKEVEPEVQEEVPKEPTPPPPRKAPSFSSYL 150
>Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical
protein C01H6.7 protein.
Length = 636
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/53 (22%), Positives = 23/53 (43%)
Frame = +2
Query: 425 ITELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIPASPTRYTKCKGFL 583
+T+ KK + + + D + EP+ + E P+ P P P + +L
Sbjct: 98 LTDYHLKKKKILARKAARDAEKEKEVEPEVQEEVPKEPTPPPPRKAPSFSSYL 150
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 332 ANSTVFPLQKVRLFSTSPPPDYISSIEDKKAITELKELKKNY-ITKTTSGDKPPPIQEEP 508
A + V ++R +++PP +S + + T++ L+ + + K+ S + P Q+EP
Sbjct: 76 AQAAVVATAQIRKVASAPPT---TSTDPPLSYTQINCLENVHRLLKSQSRPESPAKQDEP 132
Query: 509 DCEPEY-PQSPIPASP-TRYTK 568
E +Y PQ+P+ T +TK
Sbjct: 133 FDEKKYPPQTPLTREALTLHTK 154
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 332 ANSTVFPLQKVRLFSTSPPPDYISSIEDKKAITELKELKKNY-ITKTTSGDKPPPIQEEP 508
A + V ++R +++PP +S + + T++ L+ + + K+ S + P Q+EP
Sbjct: 376 AQAAVVATAQIRKVASAPPT---TSTDPPLSYTQINCLENVHRLLKSQSRPESPAKQDEP 432
Query: 509 DCEPEY-PQSPIPASP-TRYTK 568
E +Y PQ+P+ T +TK
Sbjct: 433 FDEKKYPPQTPLTREALTLHTK 454
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 27.5 bits (58), Expect = 9.6
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 2/123 (1%)
Frame = +2
Query: 194 TKTPLARGPYGSWCTPET-SPIHHPLTQTNSNIETKTQLQDQKRFLEANSTVFPLQKVRL 370
+KTP+ S E+ + HP+ + + E TQ + + S R
Sbjct: 974 SKTPVKEERPESHSLSESFASTQHPMKISEIS-ENSTQNRSDSSRIGLRSVKLEQIPSRT 1032
Query: 371 FSTSPPPDYISSIEDKKAIT-ELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
P D+ S+ E + I E + L+ + + +S PPI +E E P+ P
Sbjct: 1033 IKVEEPTDFPSNSEPEAQIPLETRTLEPS---EASSVQPEPPIDQEEAENDENPEILTPN 1089
Query: 548 SPT 556
SPT
Sbjct: 1090 SPT 1092
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 27.5 bits (58), Expect = 9.6
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 2/123 (1%)
Frame = +2
Query: 194 TKTPLARGPYGSWCTPET-SPIHHPLTQTNSNIETKTQLQDQKRFLEANSTVFPLQKVRL 370
+KTP+ S E+ + HP+ + + E TQ + + S R
Sbjct: 974 SKTPVKEERPESHSLSESFASTQHPMKISEIS-ENSTQNRSDSSRIGLRSVKLEQIPSRT 1032
Query: 371 FSTSPPPDYISSIEDKKAIT-ELKELKKNYITKTTSGDKPPPIQEEPDCEPEYPQSPIPA 547
P D+ S+ E + I E + L+ + + +S PPI +E E P+ P
Sbjct: 1033 IKVEEPTDFPSNSEPEAQIPLETRTLEPS---EASSVQPEPPIDQEEAENDENPEILTPN 1089
Query: 548 SPT 556
SPT
Sbjct: 1090 SPT 1092
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 335 SLLETVSDLEAEFLFRCSSLFASTGDEWARSLAYTKNHTAH 213
+LL + +L+ EF A T D WAR ++ N T H
Sbjct: 25 NLLNEIEELQVEFQDGMVEFRAITQDTWARMVSKHINPTGH 65
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 287 IETKTQLQDQKRFLEANSTVFPLQKVRLFSTSPP-PDYISSIEDKKAITELKELKKNYIT 463
+ + + L Q + ++ TVF VRLF S P + +S+ + + TE + +
Sbjct: 192 LSSTSNLSKQSKSIKDLVTVFRRDDVRLFFNSQPWKNSLSTSDPSISATEAEASEDPEHL 251
Query: 464 KTTSGDKPPPIQEEPDCEPEYPQSPIP 544
+ PPI E+ + E + +P
Sbjct: 252 DDVITEPAPPIGEQTLSDDEEEEEEVP 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,527,853
Number of Sequences: 27780
Number of extensions: 370758
Number of successful extensions: 1447
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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