Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28d06
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    25   1.8  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.2  

>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +1

Query: 631 IRISCFAQ*KSRDEADHSSDPVDVF 705
           I+  CF + +++++AD + +PVD F
Sbjct: 78  IKKQCFMEVRNKNKADGAYEPVDFF 102


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 497 WSSETWDSAVFNSANSEKTLTPKSSTSYGATT 592
           W    W    F ++ ++ T TPKS T  GAT+
Sbjct: 466 WPDSFWR---FYNSKTKSTHTPKSITYKGATS 494


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,142
Number of Sequences: 2352
Number of extensions: 12949
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)