Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28d02
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   7.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.6  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 281 WRHTASLARDLGSTIKTEKDKFQINLDVQHFSPDEISV 394
           ++H      D+G ++ T K    ++  VQ+F  D I +
Sbjct: 3   FKHRKQRFVDIGDSLLTLKLTHALSSSVQNFPSDAIKI 40


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 175 ARQQTCGSGLRDAANSGRLLNKHDDAV 255
           A  +TCG+GL   A+  + L ++ D +
Sbjct: 49  AELKTCGNGLAFDASDPKFLTENCDYI 75


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 175 ARQQTCGSGLRDAANSGRLLNKHDDAV 255
           A  +TCG+GL   A+  + L ++ D +
Sbjct: 49  AELKTCGNGLAFDASDPKFLTENCDYI 75


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 632  PCEPGQF 612
            PCEPGQ+
Sbjct: 1102 PCEPGQY 1108


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +2

Query: 410 YVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTANVVSELSTDG 544
           Y  + A H ++ DE   ++     +Y L EGA  + +   L T G
Sbjct: 221 YAPLYASHLDQTDEQKTLNVAAGIQYWLDEGAPPSKINLGLGTYG 265


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 515 NVVSELSTDGILTVTAPRK 571
           N V   S + +LTVTAP K
Sbjct: 311 NSVGGESVETVLTVTAPLK 329


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 202 LRDAANSGRLLNKHDDAVDSSRLLPTLAAHGVFGPRPRLH 321
           L D  +    +   DD  D    L   +AH V  P+P LH
Sbjct: 32  LSDRDDDDENITVDDDDTDGRESLSPSSAHTVLIPQP-LH 70


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 609 VIGTTLSPLSSITFLGAV 556
           V+ TT+S  S ITF+  V
Sbjct: 394 VLKTTMSTFSDITFMRTV 411


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 359 DVQHFSPDEISVKTAEGYVVV--EAKHEEKQDEH 454
           D +  SP     + A+G VVV  E   EE+ + H
Sbjct: 846 DKREKSPTSDKAQEADGEVVVKKEVDEEERLENH 879


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,957
Number of Sequences: 336
Number of extensions: 3295
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)