Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28d02
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   145   1e-36
AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin depend...    23   6.9  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  145 bits (352), Expect = 1e-36
 Identities = 69/110 (62%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
 Frame = +2

Query: 308 DLGSTIKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKY 487
           D GS +   KDKFQINLDVQ FSP+EISVK  +  V+VE KHEEKQD+HGYVSR FVR+Y
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 488 SLPEGADTANVVSELSTDGILTVTAPRKVIDDKG-ERVVPITKTGPVRKE 634
            LP+G + A++VS LS+DGILT+T PRK I+ K  ER +PIT TG   K+
Sbjct: 63  MLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQ 112


>AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin dependent
           peroxidase protein.
          Length = 97

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -2

Query: 513 AVSAPSGKEYLR-TNC 469
           +V+ PSGK+YLR T C
Sbjct: 80  SVTLPSGKQYLRKTEC 95


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,831
Number of Sequences: 2352
Number of extensions: 13670
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)