Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28c24
         (623 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051744-1|AAK93168.1|  354|Drosophila melanogaster LD27042p pro...    79   4e-15
AE014296-3392|AAF51620.1|  354|Drosophila melanogaster CG5047-PA...    79   4e-15
DQ414686-1|ABD75710.1|  354|Drosophila melanogaster MTERF3 protein.    79   6e-15

>AY051744-1|AAK93168.1|  354|Drosophila melanogaster LD27042p
           protein.
          Length = 354

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = +3

Query: 390 TFNLAAYVNHSKTLQNLIDLNVNISKFEKKPYIIEKLLKLDFEKNMKSHIVFLSDY-VNM 566
           +FNLAAYVN+S TLQ  + L V++   E++  + + +LKLDFEKN+K +I FL D  V+ 
Sbjct: 80  SFNLAAYVNNSSTLQQFLSLGVDLHSIERRKGLGDFVLKLDFEKNVKPYITFLVDQGVSP 139

Query: 567 EQMGEFFTKNPMIFCEHLE 623
           +  G  FTKNP++F E L+
Sbjct: 140 DDFGRMFTKNPLLFKEDLD 158


>AE014296-3392|AAF51620.1|  354|Drosophila melanogaster CG5047-PA
           protein.
          Length = 354

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = +3

Query: 390 TFNLAAYVNHSKTLQNLIDLNVNISKFEKKPYIIEKLLKLDFEKNMKSHIVFLSDY-VNM 566
           +FNLAAYVN+S TLQ  + L V++   E++  + + +LKLDFEKN+K +I FL D  V+ 
Sbjct: 80  SFNLAAYVNNSSTLQQFLSLGVDLHSIERRKGLGDFVLKLDFEKNVKPYITFLVDQGVSP 139

Query: 567 EQMGEFFTKNPMIFCEHLE 623
           +  G  FTKNP++F E L+
Sbjct: 140 DDFGRMFTKNPLLFKEDLD 158


>DQ414686-1|ABD75710.1|  354|Drosophila melanogaster MTERF3 protein.
          Length = 354

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 38/79 (48%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = +3

Query: 390 TFNLAAYVNHSKTLQNLIDLNVNISKFEKKPYIIEKLLKLDFEKNMKSHIVFLSDY-VNM 566
           +FNLAAYVN+S TLQ  + L V++   E++  + + +LKLDFEKN K +I FL D  V+ 
Sbjct: 80  SFNLAAYVNNSSTLQQFLSLGVDLHSIERRKGLGDFVLKLDFEKNAKPYITFLVDQGVSP 139

Query: 567 EQMGEFFTKNPMIFCEHLE 623
           +  G  FTKNP++F E L+
Sbjct: 140 DDFGRMFTKNPLLFKEDLD 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,347,067
Number of Sequences: 53049
Number of extensions: 469438
Number of successful extensions: 943
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)