Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28c22
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           33   0.006
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   2.9  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   5.0  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   5.0  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   5.0  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   5.0  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   6.6  
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    23   6.6  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   8.8  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 33.5 bits (73), Expect = 0.006
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 633 NCFPSQETDSMRHSGDTYGGCSFAKATGLAAAGNPGKGAL 514
           N FPS+     +H      GCS + + GLA  G PG G L
Sbjct: 707 NRFPSRPRRQQQHQPSALAGCSGSSSGGLARNGVPGLGPL 746


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 162 NQLLCTTKNHGEHHRSC 212
           +  +C+T NHG+  R C
Sbjct: 513 SSFVCSTTNHGDQERPC 529


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 311 RIVQQPCEKPKD-TEREIAQRTRPRIVMTPAVSMDDIENPRARDILCND 454
           R++++P  KP D  ++E+++R +        + MD++  P  +  L N+
Sbjct: 82  RLLKEPVAKPSDMVKQEVSKRCKALASFMEEL-MDEVAQPELKLNLLNE 129


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 311 RIVQQPCEKPKD-TEREIAQRTRPRIVMTPAVSMDDIENPRARDILCND 454
           R++++P  KP D  ++E+++R +        + MD++  P  +  L N+
Sbjct: 82  RLLKEPVAKPSDMVKQEVSKRCKALASFMEEL-MDEVAQPELKLNLLNE 129


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 311 RIVQQPCEKPKD-TEREIAQRTRPRIVMTPAVSMDDIENPRARDILCND 454
           R++++P  KP D  ++E+++R +        + MD++  P  +  L N+
Sbjct: 82  RLLKEPVAKPSDMVKQEVSKRCKALASFMEEL-MDEVAQPELKLNLLNE 129


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 311 RIVQQPCEKPKD-TEREIAQRTRPRIVMTPAVSMDDIENPRARDILCND 454
           R++++P  KP D  ++E+++R +        + MD++  P  +  L N+
Sbjct: 82  RLLKEPVAKPSDMVKQEVSKRCKALASFMEEL-MDEVAQPELKLNLLNE 129


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 62  RLRKIMSDKRIESMLFDYGTTNRTDYRNGEIRP 160
           + RK++    +++ + D    NR++   G IRP
Sbjct: 55  KARKVLLTPALQAYIMDEHNLNRSNIALGRIRP 87


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 62  RLRKIMSDKRIESMLFDYGTTNRTDYRNGEIRP 160
           + RK++    +++ + D    NR++   G IRP
Sbjct: 55  KARKVLLTPALQAYIMDEHNLNRSNIALGRIRP 87


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = +3

Query: 162 NQLLCTTKNHGEHHRSCVHLKTSTRFPIGRLKRYLSVC 275
           N + C      +HH  C  L   +   +GR  + L +C
Sbjct: 48  NSVSCAGVCGSKHHTHCTGLSRDSTRELGRNNQLLWLC 85


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,620
Number of Sequences: 2352
Number of extensions: 12862
Number of successful extensions: 60
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)