Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28c21
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           26   1.2  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    26   1.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.8  
EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.           24   3.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.4  

>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/69 (21%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 357 NSELDKIEKRVYETVSQELQTDESSSISL-DSNIKFFKTTVEKLFENFYTSMRDFDLYKQ 533
           ++ELD   K+    +  +  T+E S + L  + +K ++    +       ++RD+D+Y+Q
Sbjct: 405 HAELDGTLKQAVGQIELQNATEEQSPLQLLRAIVKRYEEMYVEQQSAQNNAIRDWDMYQQ 464

Query: 534 RFNEILAKN 560
           +  ++  +N
Sbjct: 465 KETQLAEEN 473


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 199 RPSSLIQM*TFRKVPHSPTSIHLQSITNDMSTMKCP 306
           RP  L Q  T+ +   +PT  H+ S+ +++S +  P
Sbjct: 544 RPEELFQPNTYNRFLVAPTGDHVISLIDEISYLSAP 579


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 474  VEKLFENFYTSMR-DFDLYKQRFNEILAKNKEESLVDMEDFIN 599
            +E  +  ++ S+  DFD Y++ FN     N   S      F+N
Sbjct: 1626 IESEYARYFFSVHPDFDYYERMFNYAYRGNYHPSCAVSNKFVN 1668


>EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 14/69 (20%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 357 NSELDKIEKRVYETVSQELQTDESSSISL-DSNIKFFKTTVEKLFENFYTSMRDFDLYKQ 533
           ++ELD   ++    +  +  T+E S + L  + +K ++    +       ++RD+D+Y+Q
Sbjct: 405 HAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSAQNNAIRDWDMYQQ 464

Query: 534 RFNEILAKN 560
           +  ++  +N
Sbjct: 465 KETQLAEEN 473


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 330  TTDKDVILTNSELDKIEKRVYETVSQELQTDE 425
            TT+K + L ++  DK+E  V E   +  + DE
Sbjct: 918  TTEKRIRLVSATQDKLEDVVEELEGKNRERDE 949


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 123 LALKMPNACDLYLKTRHSFCSPRQRA 200
           LA  + NACD  L  R     PR+RA
Sbjct: 246 LASAIANACDTSLPRRKGGPYPRRRA 271


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,303
Number of Sequences: 2352
Number of extensions: 9501
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)