Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28c19
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.85 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.85 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.85 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.85 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.85 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.85 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.85 
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    25   0.85 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    25   0.85 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.85 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.4  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  IPKEINFDRYLDENNKIKKSSLVCL 166
           + KE +F+RYL    +I+ +  +CL
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCL 259


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  IPKEINFDRYLDENNKIKKSSLVCL 166
           + KE +F+RYL    +I+ +  +CL
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCL 259


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  IPKEINFDRYLDENNKIKKSSLVCL 166
           + KE +F+RYL    +I+ +  +CL
Sbjct: 257 LEKEFHFNRYLTRRRRIEIAHALCL 281


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  IPKEINFDRYLDENNKIKKSSLVCL 166
           + KE +F+RYL    +I+ +  +CL
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCL 259


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  IPKEINFDRYLDENNKIKKSSLVCL 166
           + KE +F+RYL    +I+ +  +CL
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCL 259


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  IPKEINFDRYLDENNKIKKSSLVCL 166
           + KE +F+RYL    +I+ +  +CL
Sbjct: 191 LEKEFHFNRYLTRRRRIEIAHALCL 215


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  IPKEINFDRYLDENNKIKKSSLVCL 166
           + KE +F+RYL    +I+ +  +CL
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCL 259


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  IPKEINFDRYLDENNKIKKSSLVCL 166
           + KE +F+RYL    +I+ +  +CL
Sbjct: 23  LEKEFHFNRYLTRRRRIEIAHALCL 47


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  IPKEINFDRYLDENNKIKKSSLVCL 166
           + KE +F+RYL    +I+ +  +CL
Sbjct: 259 LEKEFHFNRYLTRRRRIEIAHALCL 283


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 92  IPKEINFDRYLDENNKIKKSSLVCL 166
           + KE +F+RYL    +I+ +  +CL
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCL 259


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 664 DVNKFFNRETEGLRVFWV 717
           D+N F+  +TE   V WV
Sbjct: 38  DINSFYFYKTEQFTVLWV 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,525
Number of Sequences: 336
Number of extensions: 3808
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)