Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28c18
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022830-1|AAY55246.1|  669|Drosophila melanogaster IP13337p pro...    31   1.1  
AE014134-2446|AAF53366.2|  648|Drosophila melanogaster CG18146-P...    31   1.1  
AE014134-2445|AAO41187.1|  701|Drosophila melanogaster CG18146-P...    31   1.1  
AF160879-1|AAD46820.1|  402|Drosophila melanogaster GH07762p pro...    29   8.0  
AE014134-2437|AAF53360.2|  402|Drosophila melanogaster CG33119-P...    29   8.0  

>BT022830-1|AAY55246.1|  669|Drosophila melanogaster IP13337p
           protein.
          Length = 669

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 1/93 (1%)
 Frame = +1

Query: 181 ICGCVLGFVTATILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF*GASQFCKPKLSSSV 360
           IC C LGF+       C P C  K     C  +    C E  ++  G++  C P+     
Sbjct: 410 ICQCDLGFIKRWATGTCEPHCPQKCVNSHCLGSGVCRCYEGYKLRPGSTSICDPECQPG- 468

Query: 361 ALIMSCVSATSILTIFGLL-LVVPFICEKYIRP 456
               +CV   S     G     VP+ C    RP
Sbjct: 469 CRNGTCVEPNSCACFAGYEDTKVPYECVPSCRP 501



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +1

Query: 181 ICGCVLGFVTA--TILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF-*GASQFCKPKLS 351
           +C C +G+     T+   C P+CN      +C    +  CSE G +F  G+   C P   
Sbjct: 201 VCACKMGYAHKDNTLASGCEPVCNPPCTNGTCISPGHCACSE-GHVFAEGSRHECVPSCR 259

Query: 352 S 354
           S
Sbjct: 260 S 260


>AE014134-2446|AAF53366.2|  648|Drosophila melanogaster CG18146-PA,
           isoform A protein.
          Length = 648

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 1/93 (1%)
 Frame = +1

Query: 181 ICGCVLGFVTATILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF*GASQFCKPKLSSSV 360
           IC C LGF+       C P C  K     C  +    C E  ++  G++  C P+     
Sbjct: 389 ICQCDLGFIKRWATGTCEPHCPQKCVNSHCLGSGVCRCYEGYKLRPGSTSICDPECQPG- 447

Query: 361 ALIMSCVSATSILTIFGLL-LVVPFICEKYIRP 456
               +CV   S     G     VP+ C    RP
Sbjct: 448 CRNGTCVEPNSCACFAGYEDTKVPYECVPSCRP 480



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +1

Query: 181 ICGCVLGFVTA--TILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF-*GASQFCKPKLS 351
           +C C +G+     T+   C P+CN      +C    +  CSE G +F  G+   C P   
Sbjct: 180 VCACKMGYAHKDNTLASGCEPVCNPPCTNGTCISPGHCACSE-GHVFAEGSRHECVPSCR 238

Query: 352 S 354
           S
Sbjct: 239 S 239


>AE014134-2445|AAO41187.1|  701|Drosophila melanogaster CG18146-PB,
           isoform B protein.
          Length = 701

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 1/93 (1%)
 Frame = +1

Query: 181 ICGCVLGFVTATILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF*GASQFCKPKLSSSV 360
           IC C LGF+       C P C  K     C  +    C E  ++  G++  C P+     
Sbjct: 442 ICQCDLGFIKRWATGTCEPHCPQKCVNSHCLGSGVCRCYEGYKLRPGSTSICDPECQPG- 500

Query: 361 ALIMSCVSATSILTIFGLL-LVVPFICEKYIRP 456
               +CV   S     G     VP+ C    RP
Sbjct: 501 CRNGTCVEPNSCACFAGYEDTKVPYECVPSCRP 533



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +1

Query: 181 ICGCVLGFVTA--TILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF-*GASQFCKPKLS 351
           +C C +G+     T+   C P+CN      +C    +  CSE G +F  G+   C P   
Sbjct: 233 VCACKMGYAHKDNTLASGCEPVCNPPCTNGTCISPGHCACSE-GHVFAEGSRHECVPSCR 291

Query: 352 S 354
           S
Sbjct: 292 S 292


>AF160879-1|AAD46820.1|  402|Drosophila melanogaster GH07762p
           protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/68 (26%), Positives = 25/68 (36%)
 Frame = +1

Query: 181 ICGCVLGFVTATILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF*GASQFCKPKLSSSV 360
           +C C   FV       C+  C        C  N   +C +   +     QFC+PK S S 
Sbjct: 126 VCECFAEFVRNEH-GACIHTCPIACQHGRCYLNGTCVCHQNFVLDQETRQFCRPKCSQSC 184

Query: 361 ALIMSCVS 384
                CV+
Sbjct: 185 GTHEECVA 192


>AE014134-2437|AAF53360.2|  402|Drosophila melanogaster CG33119-PA
           protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/68 (26%), Positives = 25/68 (36%)
 Frame = +1

Query: 181 ICGCVLGFVTATILFVCLPLCNSKLNKLSCTCNPNPICSECGEIF*GASQFCKPKLSSSV 360
           +C C   FV       C+  C        C  N   +C +   +     QFC+PK S S 
Sbjct: 126 VCECFAEFVRNEH-GACIHTCPIACQHGRCYLNGTCVCHQNFVLDQETRQFCRPKCSQSC 184

Query: 361 ALIMSCVS 384
                CV+
Sbjct: 185 GTHEECVA 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,817,421
Number of Sequences: 53049
Number of extensions: 687438
Number of successful extensions: 1401
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)