BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28c15
(670 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D76444-1|BAA19739.1| 685|Homo sapiens hkf-1 protein. 34 0.53
BC110333-1|AAI10334.1| 685|Homo sapiens ring finger protein 103... 34 0.53
BC035053-1|AAH35053.1| 685|Homo sapiens ring finger protein 103... 34 0.53
AC015971-1|AAX93079.1| 685|Homo sapiens unknown protein. 34 0.53
AB052743-1|BAB20900.1| 685|Homo sapiens KF-1 protein protein. 34 0.53
AL357774-2|CAI40843.1| 544|Homo sapiens p21 (CDKN1A)-activated ... 30 6.5
AL357774-1|CAI40844.1| 559|Homo sapiens p21 (CDKN1A)-activated ... 30 6.5
AL117326-3|CAI43167.1| 544|Homo sapiens p21 (CDKN1A)-activated ... 30 6.5
AL117326-2|CAI43168.1| 559|Homo sapiens p21 (CDKN1A)-activated ... 30 6.5
AL031117-6|CAI43157.1| 544|Homo sapiens p21 (CDKN1A)-activated ... 30 6.5
AL031117-5|CAI43158.1| 559|Homo sapiens p21 (CDKN1A)-activated ... 30 6.5
AF068864-1|AAC36097.1| 544|Homo sapiens p21-activated kinase 3 ... 30 6.5
AB102659-1|BAC81128.1| 559|Homo sapiens p21-activated kinase 3 ... 30 6.5
>D76444-1|BAA19739.1| 685|Homo sapiens hkf-1 protein.
Length = 685
Score = 33.9 bits (74), Expect = 0.53
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 483 SHPTTVLATFDYLGNGIVFDHSGKIRLKYNQTEGVILDTKLGPVSHWKWHT 635
SHP L+T YLG+G++ D+ K R + N + V + S W W+T
Sbjct: 415 SHPALFLST--YLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYT 463
>BC110333-1|AAI10334.1| 685|Homo sapiens ring finger protein 103
protein.
Length = 685
Score = 33.9 bits (74), Expect = 0.53
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 483 SHPTTVLATFDYLGNGIVFDHSGKIRLKYNQTEGVILDTKLGPVSHWKWHT 635
SHP L+T YLG+G++ D+ K R + N + V + S W W+T
Sbjct: 415 SHPALFLST--YLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYT 463
>BC035053-1|AAH35053.1| 685|Homo sapiens ring finger protein 103
protein.
Length = 685
Score = 33.9 bits (74), Expect = 0.53
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 483 SHPTTVLATFDYLGNGIVFDHSGKIRLKYNQTEGVILDTKLGPVSHWKWHT 635
SHP L+T YLG+G++ D+ K R + N + V + S W W+T
Sbjct: 415 SHPALFLST--YLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYT 463
>AC015971-1|AAX93079.1| 685|Homo sapiens unknown protein.
Length = 685
Score = 33.9 bits (74), Expect = 0.53
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 483 SHPTTVLATFDYLGNGIVFDHSGKIRLKYNQTEGVILDTKLGPVSHWKWHT 635
SHP L+T YLG+G++ D+ K R + N + V + S W W+T
Sbjct: 415 SHPALFLST--YLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYT 463
>AB052743-1|BAB20900.1| 685|Homo sapiens KF-1 protein protein.
Length = 685
Score = 33.9 bits (74), Expect = 0.53
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 483 SHPTTVLATFDYLGNGIVFDHSGKIRLKYNQTEGVILDTKLGPVSHWKWHT 635
SHP L+T YLG+G++ D+ K R + N + V + S W W+T
Sbjct: 415 SHPALFLST--YLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYT 463
>AL357774-2|CAI40843.1| 544|Homo sapiens p21 (CDKN1A)-activated
kinase 3 protein.
Length = 544
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = +3
Query: 381 RNGQLALD---YYDAEESNAQQRFVVYSSGEKNENG--RSHPTT 497
+N Q LD +YD++E+ Q+++ ++SG+K+ +G +HP++
Sbjct: 114 KNPQAVLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIAAHPSS 157
>AL357774-1|CAI40844.1| 559|Homo sapiens p21 (CDKN1A)-activated
kinase 3 protein.
Length = 559
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = +3
Query: 381 RNGQLALD---YYDAEESNAQQRFVVYSSGEKNENG--RSHPTT 497
+N Q LD +YD++E+ Q+++ ++SG+K+ +G +HP++
Sbjct: 129 KNPQAVLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIAAHPSS 172
>AL117326-3|CAI43167.1| 544|Homo sapiens p21 (CDKN1A)-activated
kinase 3 protein.
Length = 544
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = +3
Query: 381 RNGQLALD---YYDAEESNAQQRFVVYSSGEKNENG--RSHPTT 497
+N Q LD +YD++E+ Q+++ ++SG+K+ +G +HP++
Sbjct: 114 KNPQAVLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIAAHPSS 157
>AL117326-2|CAI43168.1| 559|Homo sapiens p21 (CDKN1A)-activated
kinase 3 protein.
Length = 559
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = +3
Query: 381 RNGQLALD---YYDAEESNAQQRFVVYSSGEKNENG--RSHPTT 497
+N Q LD +YD++E+ Q+++ ++SG+K+ +G +HP++
Sbjct: 129 KNPQAVLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIAAHPSS 172
>AL031117-6|CAI43157.1| 544|Homo sapiens p21 (CDKN1A)-activated
kinase 3 protein.
Length = 544
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = +3
Query: 381 RNGQLALD---YYDAEESNAQQRFVVYSSGEKNENG--RSHPTT 497
+N Q LD +YD++E+ Q+++ ++SG+K+ +G +HP++
Sbjct: 114 KNPQAVLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIAAHPSS 157
>AL031117-5|CAI43158.1| 559|Homo sapiens p21 (CDKN1A)-activated
kinase 3 protein.
Length = 559
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = +3
Query: 381 RNGQLALD---YYDAEESNAQQRFVVYSSGEKNENG--RSHPTT 497
+N Q LD +YD++E+ Q+++ ++SG+K+ +G +HP++
Sbjct: 129 KNPQAVLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIAAHPSS 172
>AF068864-1|AAC36097.1| 544|Homo sapiens p21-activated kinase 3
protein.
Length = 544
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = +3
Query: 381 RNGQLALD---YYDAEESNAQQRFVVYSSGEKNENG--RSHPTT 497
+N Q LD +YD++E+ Q+++ ++SG+K+ +G +HP++
Sbjct: 114 KNPQAVLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIAAHPSS 157
>AB102659-1|BAC81128.1| 559|Homo sapiens p21-activated kinase 3
protein.
Length = 559
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = +3
Query: 381 RNGQLALD---YYDAEESNAQQRFVVYSSGEKNENG--RSHPTT 497
+N Q LD +YD++E+ Q+++ ++SG+K+ +G +HP++
Sbjct: 129 KNPQAVLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIAAHPSS 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,334,873
Number of Sequences: 237096
Number of extensions: 1844981
Number of successful extensions: 6296
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6296
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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