Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28c15
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p pro...    29   5.7  
AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB...    29   5.7  
AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA...    29   5.7  
AY060943-1|AAL28491.1|  609|Drosophila melanogaster GM08365p pro...    29   7.6  
AE014297-4093|AAF56680.3|  653|Drosophila melanogaster CG5923-PB...    29   7.6  
AE014297-4092|AAF56681.1|  653|Drosophila melanogaster CG5923-PA...    29   7.6  

>AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p
           protein.
          Length = 610

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
 Frame = +3

Query: 111 LMSKVKKNDIDQESTKGITRYALSDRSFIDKGWT--LLPIEKVVRKMNVYRMRPAHPEFN 284
           L+     N++  E   G  +    D   I    T  + P+   V   NV ++ P +P F+
Sbjct: 413 LLGSFGDNELSPECLDGALKLLKPDGISIPYKSTSYINPLMSAVLHQNVCQLLPTYPAFD 472

Query: 285 WFERNKNKGIKHYDSGEKLAEF 350
           +   +  K I H D  + L EF
Sbjct: 473 YGYVSLLKNIYHIDEPQALFEF 494


>AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB,
           isoform B protein.
          Length = 605

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
 Frame = +3

Query: 111 LMSKVKKNDIDQESTKGITRYALSDRSFIDKGWT--LLPIEKVVRKMNVYRMRPAHPEFN 284
           L+     N++  E   G  +    D   I    T  + P+   V   NV ++ P +P F+
Sbjct: 408 LLGSFGDNELSPECLDGALKLLKPDGISIPYKSTSYINPLMSAVLHQNVCQLLPTYPAFD 467

Query: 285 WFERNKNKGIKHYDSGEKLAEF 350
           +   +  K I H D  + L EF
Sbjct: 468 YGYVSLLKNIYHIDEPQALFEF 489


>AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA,
           isoform A protein.
          Length = 610

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
 Frame = +3

Query: 111 LMSKVKKNDIDQESTKGITRYALSDRSFIDKGWT--LLPIEKVVRKMNVYRMRPAHPEFN 284
           L+     N++  E   G  +    D   I    T  + P+   V   NV ++ P +P F+
Sbjct: 413 LLGSFGDNELSPECLDGALKLLKPDGISIPYKSTSYINPLMSAVLHQNVCQLLPTYPAFD 472

Query: 285 WFERNKNKGIKHYDSGEKLAEF 350
           +   +  K I H D  + L EF
Sbjct: 473 YGYVSLLKNIYHIDEPQALFEF 494


>AY060943-1|AAL28491.1|  609|Drosophila melanogaster GM08365p
           protein.
          Length = 609

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +3

Query: 489 PTTVLATFDYLGNGIVFDHSGKIRLKYNQTEGVILDTKLG 608
           P T+ A   Y+ N ++ D    +R+++NQT   ++D KLG
Sbjct: 211 PLTI-ANLGYM-NDLLTDRCHNLRVRFNQTGPALVDKKLG 248


>AE014297-4093|AAF56680.3|  653|Drosophila melanogaster CG5923-PB,
           isoform B protein.
          Length = 653

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +3

Query: 489 PTTVLATFDYLGNGIVFDHSGKIRLKYNQTEGVILDTKLG 608
           P T+ A   Y+ N ++ D    +R+++NQT   ++D KLG
Sbjct: 255 PLTI-ANLGYM-NDLLTDRCHNLRVRFNQTGPALVDKKLG 292


>AE014297-4092|AAF56681.1|  653|Drosophila melanogaster CG5923-PA,
           isoform A protein.
          Length = 653

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +3

Query: 489 PTTVLATFDYLGNGIVFDHSGKIRLKYNQTEGVILDTKLG 608
           P T+ A   Y+ N ++ D    +R+++NQT   ++D KLG
Sbjct: 255 PLTI-ANLGYM-NDLLTDRCHNLRVRFNQTGPALVDKKLG 292


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,210,734
Number of Sequences: 53049
Number of extensions: 585672
Number of successful extensions: 1452
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)