Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28c15
         (670 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           25   0.86 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   3.5  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   8.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.0  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 600 KLGPVSHWKWHTLND 644
           KL P  +W+WHT+ +
Sbjct: 227 KLRPYPNWEWHTVGN 241


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 66  YFYSFTHLNRFPVILLMSKVKKNDIDQESTK 158
           YFY F  ++RF V L   +   N I+++S++
Sbjct: 538 YFYLFMEMDRFAVTL---RPGSNSIERQSSE 565


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 66  YFYSFTHLNRFPVILLMSKVKKNDIDQESTK 158
           YFY F  ++RF V L   +   N I+++S++
Sbjct: 538 YFYLFMEMDRFAVTL---RPGSNSIERQSSE 565


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 476 WSITSYHRFS 505
           W+ITSYHR +
Sbjct: 72  WTITSYHRIN 81


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 541 ITVVKFDSNTIKLKALYWTQN*DQ 612
           +T   FD  T  +K   WT N DQ
Sbjct: 155 VTYFPFDQQTCIMKFGSWTFNGDQ 178


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +3

Query: 267 AHPEFNWFER 296
           +HP ++WFE+
Sbjct: 258 SHPTYDWFEK 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,843
Number of Sequences: 438
Number of extensions: 3931
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)