Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28c09
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    28   0.088
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 27.9 bits (59), Expect = 0.088
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 476 VIIFRALLYFERLEGEQVLVSQLYFWKVFHAIL 574
           +I+F  LLYF  LE   +   QLY +  F  +L
Sbjct: 50  LILFAVLLYFASLEKNPLFDGQLYSFNTFAKLL 82


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 581 SFPKSREILSRSKAVKPEPVPPPNARNT 498
           S P   E +S S    P P PPP  R T
Sbjct: 83  SSPILAEKVSVSPTTPPTPSPPPEERLT 110


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -3

Query: 590 ILDSFPKSREILSRSKAVKPEPVPPPNARNTIKP 489
           +L     S    S   A K +P P P +RN  +P
Sbjct: 237 LLAGLQSSGSSRSHQPATKSKPRPAPASRNAPEP 270


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 551 RSKAVKPEPVPPPNARNT 498
           +S  + PEPVP P  + T
Sbjct: 387 KSDEIPPEPVPTPEPQPT 404


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 12  QCQVRCDILKYYF 50
           QC  R D+LK++F
Sbjct: 401 QCGRRADVLKFWF 413


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,123
Number of Sequences: 336
Number of extensions: 4447
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)