Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28c09
(721 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 66 1e-12
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 66 1e-12
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 66 1e-12
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 66 1e-12
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 37 5e-04
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 5.4
DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein. 23 7.2
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 23 7.2
AM182454-1|CAJ65692.1| 182|Anopheles gambiae globin 2 protein. 23 7.2
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 65.7 bits (153), Expect = 1e-12
Identities = 31/104 (29%), Positives = 51/104 (49%)
Frame = +1
Query: 409 YFGVGREMLDVALNRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSK 588
++ G E++D L+ +R E+CD +QGF + + I ++
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 589 IEYAIYPAPKISPIIVESYNAVLTSHACMNTEDVCFLFDNEALY 720
Y++ P+PK+S +VE YNA L+ H + D + DNEALY
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALY 104
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 65.7 bits (153), Expect = 1e-12
Identities = 31/104 (29%), Positives = 51/104 (49%)
Frame = +1
Query: 409 YFGVGREMLDVALNRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSK 588
++ G E++D L+ +R E+CD +QGF + + I ++
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 589 IEYAIYPAPKISPIIVESYNAVLTSHACMNTEDVCFLFDNEALY 720
Y++ P+PK+S +VE YNA L+ H + D + DNEALY
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALY 104
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 65.7 bits (153), Expect = 1e-12
Identities = 31/104 (29%), Positives = 51/104 (49%)
Frame = +1
Query: 409 YFGVGREMLDVALNRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSK 588
++ G E++D L+ +R E+CD +QGF + + I ++
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 589 IEYAIYPAPKISPIIVESYNAVLTSHACMNTEDVCFLFDNEALY 720
Y++ P+PK+S +VE YNA L+ H + D + DNEALY
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALY 104
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 65.7 bits (153), Expect = 1e-12
Identities = 31/104 (29%), Positives = 51/104 (49%)
Frame = +1
Query: 409 YFGVGREMLDVALNRIRSVTEDCDNIQGFIVFRXXXXXXXXXXXXXXLESISRDFGKLSK 588
++ G E++D L+ +R E+CD +QGF + + I ++
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 589 IEYAIYPAPKISPIIVESYNAVLTSHACMNTEDVCFLFDNEALY 720
Y++ P+PK+S +VE YNA L+ H + D + DNEALY
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALY 104
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 37.1 bits (82), Expect = 5e-04
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 103 MKEILHIHIGQAGVQAANACWE 168
M+E + +H+GQAGVQ N CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -3
Query: 395 LLAASSLPVIREEEWKSCRYTPVLISSMGVGSKSIITTRGTNFPAPVSLK 246
+L P + + KSC +PV S V + R + P+PV L+
Sbjct: 332 ILGTLITPELWMKNCKSCSISPVSDRSESVSPVPSLPVRSSPEPSPVLLR 381
>DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein.
Length = 494
Score = 23.4 bits (48), Expect = 7.2
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -3
Query: 341 RYTPVLISSMGVGSKSIITTRGTNFPAPVSLKKCPQLLSLSGNARTPS 198
RYTP++ ++ V + T GT PAP +++ P + ++ P+
Sbjct: 34 RYTPMVRTAQRVALRHSFETDGT--PAPSTVRPRPPAPPTNAPSQLPA 79
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 23.4 bits (48), Expect = 7.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 554 SRSKAVKPEPVPPPNARNTIKP 489
S+S+A +P P PP A KP
Sbjct: 649 SQSQASEPTPALPPRADRDSKP 670
>AM182454-1|CAJ65692.1| 182|Anopheles gambiae globin 2 protein.
Length = 182
Score = 23.4 bits (48), Expect = 7.2
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 467 QKIVIIFRALL-YFERLEGEQVLVSQL-YFWKVFHAILGNCP 586
+ I+ I LL Y E+ G Q+ S FWK+F I G P
Sbjct: 108 EDILTIGEVLLNYLEQALGRQMSDSLPDAFWKLFQTIAGRFP 149
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,659
Number of Sequences: 2352
Number of extensions: 16954
Number of successful extensions: 46
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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