Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28b16
(669 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.20
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.46
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.61
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.61
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 1.8
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 1.8
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 27 2.4
SPCC16C4.06c |||tRNA pseudouridylate synthase |Schizosaccharomyc... 27 2.4
SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|ch... 27 3.2
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 26 4.3
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 5.6
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 5.6
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 26 5.6
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 25 7.5
SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 25 7.5
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 9.9
SPBC1718.02 |hop1||linear element associated protein Hop1|Schizo... 25 9.9
SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||M... 25 9.9
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 25 9.9
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 9.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.20
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 447 PTNSDKEKASNNSASKPCPLGRCGAGCKQH--SSPQVPSAPTPQYSPACVQHERKPLPPP 620
P++ E+ + SA P P+ G +SP P AP +PA + PLPPP
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSM-NPAINSTSKPPLPPP 295
Query: 621 TGR 629
+ R
Sbjct: 296 SSR 298
Score = 29.1 bits (62), Expect = 0.61
Identities = 25/90 (27%), Positives = 35/90 (38%)
Frame = +3
Query: 381 AFSCDNSYCPANRPPRCENTTCPTNSDKEKASNNSASKPCPLGRCGAGCKQHSSPQVPSA 560
A + + P PP N P + +SN+S P P R A PQ SA
Sbjct: 303 ALAANKKRPPPPPPPSRRNRGKPPIGNG--SSNSSLPPPPPPPRSNAAGSIPLPPQGRSA 360
Query: 561 PTPQYSPACVQHERKPLPPPTGRCVPDCPS 650
P P + R+P P + R V + P+
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPA 390
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 543 PQVPSAPTPQYSPACVQHERKPLPPPTGRCVPDCPS 650
P +PS+ P+ P+ P+PPP+ V P+
Sbjct: 234 PSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPN 269
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.46
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 414 NRPPRCENTTCPTNSDKEKASNNSASKPCPLGRCGAGCKQHSSPQVPSAPTPQYSPACVQ 593
N P T + S + NNS S PL AG + P VPSAP+ ++P
Sbjct: 1575 NIAPATNLGTSQSFSPRMGPVNNSGS---PLAMNAAGQPSLAVPAVPSAPSNHFNPFAKM 1631
Query: 594 HERKPLP-PPTG 626
P P P+G
Sbjct: 1632 QPPAPSPLQPSG 1643
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 537 SSPQVPSAPTPQYSPACVQHERKPLPPPTGRCVPDCPSDASNDS 668
+S +AP PQ +P Q + L PP VP P DS
Sbjct: 1329 TSTSFNTAPIPQQAPLENQFSKMSLEPPVRPAVPTSPKPQIPDS 1372
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 0.61
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 540 SPQVPSAPTPQYSPACVQHERKPLPPPTGRCVPDCPS 650
+P+VPS P P +P + P PP P+ PS
Sbjct: 583 APEVPSVPQPPVAPVVPEAPSVP-QPPVAPVAPEVPS 618
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 540 SPQVPSAPTPQYSPACVQHERKPLPPPTGRCVPDCPS 650
+P+VPS P P + P PP VP+ PS
Sbjct: 613 APEVPSVPQRPAVPVVPEAPSVP-QPPAAPVVPEVPS 648
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 543 PQVPSAPTPQYSPACVQHERKPLPPPTGRCVPDCPS 650
P+ S P P +P + P PP VP+ PS
Sbjct: 569 PEALSVPQPPVAPVAPEVPSVP-QPPVAPVVPEAPS 603
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 543 PQVPSAPTPQYSPACVQHERKPLPPPTGRCVPDCPS 650
P+VPS P P + P PP VP+ PS
Sbjct: 644 PEVPSVPQRPAVPVVPEAPSVP-QPPAAPVVPEVPS 678
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 29.1 bits (62), Expect = 0.61
Identities = 23/91 (25%), Positives = 31/91 (34%)
Frame = +3
Query: 396 NSYCPANRPPRCENTTCPTNSDKEKASNNSASKPCPLGRCGAGCKQHSSPQVPSAPTPQY 575
N+Y A PP + P + AS AS P P + + Q + P Y
Sbjct: 65 NAYSQAPYPPARPTSQRPNSWQPGNASTMYASPP-PSSNYNTAKPPYQTSQFYARPQSSY 123
Query: 576 SPACVQHERKPLPPPTGRCVPDCPSDASNDS 668
+P R P P G C + DS
Sbjct: 124 APPPSGRPRISYPYPPGYMCYKCHNTGYKDS 154
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 1.8
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 486 ASKPCPLGRCGAGCKQHSSPQV-PSAPTPQYSPACVQHERKPLPPPTGRCV-PDCP 647
A P+G GA PQV P+ PTP +PA H P PPP + P P
Sbjct: 707 ADSMSPMGT-GAVNSPAIKPQVTPAPPTPAPTPAVKHH---PPPPPVRSSISPSMP 758
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 531 QHSSPQVPSAPTPQYSPACVQ 593
+H +PQ PS+P YSP +Q
Sbjct: 290 EHHNPQTPSSPESAYSPENLQ 310
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/58 (24%), Positives = 23/58 (39%)
Frame = +3
Query: 336 PDCKSIQPKEYRTDEAFSCDNSYCPANRPPRCENTTCPTNSDKEKASNNSASKPCPLG 509
PD S P E+ +Y P+ P + T + ++S N A +P +G
Sbjct: 278 PDMSSPVPASSVEYESLKAAVTYSPSQNPKKVAETDSESRKSSFQSSYNDADRPFQVG 335
>SPCC16C4.06c |||tRNA pseudouridylate synthase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 413
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 523 VASSTAAPKYLVRPPRNILRHACSM-RGS 606
VA+S + P L +P + L+HAC+M RG+
Sbjct: 202 VANSLSEPFRLSKPKLDFLKHACTMFRGT 230
>SPAC12B10.08c |||mitochondrial tRNA|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 26.6 bits (56), Expect = 3.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 553 GTWGLLCCLQPAPHLPK 503
GTWG LC ++P +P+
Sbjct: 151 GTWGGLCAMKPVSQIPE 167
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 26.2 bits (55), Expect = 4.3
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 450 TNSDKEKASNNSASKPCPLGRCGAGCKQHSSPQVP 554
TN D EK NN AS L G SSP+ P
Sbjct: 497 TNKDSEKNDNNDAS----LQSAGVASDGESSPETP 527
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 83 TKRKFNGNQSSPLC----PFAVNIINDQNVKMQ*SEKSL*DLLGSGVSKNWATMRG 238
T +KF N +S P N +++NVK + + + + + +NW T+RG
Sbjct: 113 TDKKFKPNDTSITANVFNPSIQNNTDEENVKPGLKQSQIKEFIPNVEERNWETVRG 168
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 5.6
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Frame = +3
Query: 369 RTDEAFSCDNSYCPANRPP----RCENTTCPTNSDKEKASNNSASKPCPLGRCGAGCKQH 536
RT + + DN+Y PA + P R + P NS A+ N+ P + +++
Sbjct: 166 RTSQMYMPDNNYSPAVKSPAAQRRSSSYMVPANSRGSPANYNTPYYPTAI---PPPIEEY 222
Query: 537 S-SPQVPSAPTPQYSPACVQHERKPLPPPTGRCVPDCPS 650
S S +P++P + S VQ T + V PS
Sbjct: 223 SPSVSLPTSPVAEESYNNVQRSSTVRNNTTQKSVLKKPS 261
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 523 VASSTAAPKYLVRPPRNILRHACSMRGSLYPRL 621
VASSTAA K PP+ + ++ C + RL
Sbjct: 50 VASSTAAKKDPNAPPQKVKQYVCETCTRAFARL 82
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 25.4 bits (53), Expect = 7.5
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 8/74 (10%)
Frame = +3
Query: 411 ANRPPRCENTTCPTNSDKEKASNNSASKPCPLGRCGAGCKQH--------SSPQVPSAPT 566
A P T KEKA+ ++S P G K+ S+P +P
Sbjct: 202 AKVPKDVSKKEAKTTKSKEKATKKTSSS-VPKQSTGENTKKAVKLETPLTSTPPIPPLSE 260
Query: 567 PQYSPACVQHERKP 608
P++SPA V P
Sbjct: 261 PKHSPATVNEHISP 274
>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -1
Query: 615 GVEASSHAARMPENIA-GW 562
G+ ASSHA PEN A GW
Sbjct: 124 GLSASSHAHSHPENTAPGW 142
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.0 bits (52), Expect = 9.9
Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 3/110 (2%)
Frame = +3
Query: 186 CKICLGPVSQKTGLQCEGACDSWVHYGCLH-YTPGRINDIRKGIIKVTCPCPDCKSIQPK 362
C +C ++ T + G C H C+ + I + + CP C+S Q +
Sbjct: 197 CSVCTDTINPSTSIWSCGTCYHVFHLSCIRKWCKNSIEQRNEDAWR----CPYCQSNQTE 252
Query: 363 EYRTDEAFSCDNSYCPANRPPRCENTTCPTNSDKE--KASNNSASKPCPL 506
T + C +C P P + K PCPL
Sbjct: 253 ---TSLHYLC---WCGKQEKPEFVKNLVPHSCGDPCGKTRGQDCEHPCPL 296
>SPBC1718.02 |hop1||linear element associated protein
Hop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 228 QCEGACDSWVHYGC 269
QCE CD WVH C
Sbjct: 350 QCE-RCDGWVHCAC 362
>SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 155
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Frame = +3
Query: 540 SPQVPSAPTPQY--SPAC---VQHERKPLPPPTGR 629
SP ++ TPQ SPA V HER PPP R
Sbjct: 115 SPAATASNTPQNEASPAATEAVNHERPASPPPVYR 149
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 285 PECNVDNRSAPSCHKHPRIVAQFFETPDPSKSY 187
P+ NV + + + +KH +V F P KS+
Sbjct: 267 PDKNVQSSAVENKNKHTNLVTSSFNLTKPMKSF 299
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 462 KEKASNNSASKPCPLGRCGAGCKQHSSPQVPSAPTPQ 572
K+ S+ S S PL HS PQ+ + P P+
Sbjct: 65 KQTTSSPSFSHAAPLHPLSPPSFTHSQPQIQAQPVPR 101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,936,985
Number of Sequences: 5004
Number of extensions: 64104
Number of successful extensions: 183
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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