Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28b10
         (743 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F611 Cluster: Peptidyl-prolyl cis-trans isomerase; n=...    54   5e-06
UniRef50_UPI00015B5D99 Cluster: PREDICTED: similar to peptidyl-p...    42   0.021
UniRef50_A0CWG1 Cluster: Chromosome undetermined scaffold_3, who...    39   0.11 
UniRef50_Q9VW62 Cluster: CG17732-PA; n=1; Drosophila melanogaste...    38   0.34 
UniRef50_Q4QFB4 Cluster: Putative uncharacterized protein; n=3; ...    38   0.34 
UniRef50_O36161 Cluster: T4gp20 homolog; n=286; root|Rep: T4gp20...    37   0.46 
UniRef50_Q2RZ58 Cluster: PPIC-type PPIASE domain protein; n=1; S...    36   1.4  
UniRef50_Q7VK42 Cluster: Putative uncharacterized protein; n=1; ...    35   2.4  
UniRef50_Q50EY0 Cluster: P-512; n=5; Borrelia|Rep: P-512 - Borre...    34   3.2  
UniRef50_Q23AR6 Cluster: Prenyltransferase and squalene oxidase ...    34   3.2  
UniRef50_Q2FXJ2 Cluster: Iron-regulated surface determinant prot...    34   3.2  
UniRef50_Q899X8 Cluster: Putative membrane-spanning permease; n=...    34   4.2  
UniRef50_Q2BI44 Cluster: ATP-dependent helicase HrpB; n=8; Gamma...    33   7.4  
UniRef50_UPI0000E462A1 Cluster: PREDICTED: similar to LOC495937 ...    33   9.8  

>UniRef50_Q2F611 Cluster: Peptidyl-prolyl cis-trans isomerase; n=1;
           Bombyx mori|Rep: Peptidyl-prolyl cis-trans isomerase -
           Bombyx mori (Silk moth)
          Length = 306

 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
 Frame = +3

Query: 420 RSHYFKEIRKDNLQLYKRIVKAKARVQTTAELIEDWK-TKHREIEKDTT--MLYPYGPLA 590
           R     EIRK+NL  Y R++ A++    T EL E WK TKH+ I   +   +L+    + 
Sbjct: 41  RQRNLDEIRKNNLYFYSRLLIARSEQPLTKELEEHWKETKHKLILGASLPFILFKTEKID 100

Query: 591 EDHAYISTQR---TEATKVYITLRVREGAVLGVLPVVLFAECCPQTCKLFIDLL 743
            D    S  R      TKV + + V  G+ +G + + LF +  P+TC+LF+ L+
Sbjct: 101 RDIRDPSFDRPLNVYRTKVSMEVGVVGGSKIGKVTIELFNDIVPKTCQLFLSLV 154


>UniRef50_UPI00015B5D99 Cluster: PREDICTED: similar to
           peptidyl-prolyl cis-trans isomerase f, ppif; n=1;
           Nasonia vitripennis|Rep: PREDICTED: similar to
           peptidyl-prolyl cis-trans isomerase f, ppif - Nasonia
           vitripennis
          Length = 397

 Score = 41.5 bits (93), Expect = 0.021
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
 Frame = +3

Query: 210 SSITAVVDTSPPRFSSAPMYRNFEQWTQQNRQI---YATNINLLFNIKRQHFLRGKVDCN 380
           +++ AV+D   P+F    +Y + E+     R     Y  N+ +  NI     + GKVDC 
Sbjct: 46  ANMKAVIDNKAPKFD-VEIYYDREKLLADARAAKMNYKENLEITKNINTIFRMGGKVDC- 103

Query: 381 WLKLPVRPKRHDA----RSHYFKEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTKHREI 548
           W     R K+H      +   +K I KDN  LY++ V A +   +   + + WK    +I
Sbjct: 104 W---NFREKKHKTDQLEKKEMYKRIMKDNRALYEK-VNALSSEYSPRVMAKHWKVLKEQI 159

Query: 549 E 551
           E
Sbjct: 160 E 160


>UniRef50_A0CWG1 Cluster: Chromosome undetermined scaffold_3, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_3,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 428

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
 Frame = +3

Query: 204 KYSSITAVVDTSPPRFSSAPMYRNFEQWTQQNRQIY-----ATNINLLFNIKRQHFLRGK 368
           K+ SI+  V  S   F S  M+ NF+Q TQQN Q Y      T    LF+   + + + +
Sbjct: 316 KFRSISQNVPMSETNFKSQNMFLNFQQQTQQNPQSYQYYSSETEKANLFSKIIESYKQNQ 375

Query: 369 VDCNWLKLPVRPKR 410
              N +KL  +PKR
Sbjct: 376 FQLNKIKLEFKPKR 389


>UniRef50_Q9VW62 Cluster: CG17732-PA; n=1; Drosophila
           melanogaster|Rep: CG17732-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 720

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = +3

Query: 282 QWTQQNRQIYATNINLLFNIKRQHFLRGKVDCNWLKLPVRPKRHDARSHYFKEIRKDNLQ 461
           QW  QN   Y TN N LF+ ++ H        +  KLP   ++H+A     ++  KDNLQ
Sbjct: 369 QWNPQNADNY-TNQNQLFHKQQLHIQNQPYLQHHFKLPASQQQHEAIFQQQQQAGKDNLQ 427

Query: 462 ----LYKRI 476
               LY+RI
Sbjct: 428 QLRVLYQRI 436


>UniRef50_Q4QFB4 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 3115

 Score = 37.5 bits (83), Expect = 0.34
 Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
 Frame = +3

Query: 216 ITAVVDTSPPRFSSAPMYRNFEQWTQQNRQIY----ATNINLLFNIKRQHFLRGKVD 374
           ++A    S P F+ AP YR F+ +++  +Q +    A + NLL  I +QH L G+VD
Sbjct: 1   MSASTPASTPAFTGAPWYRAFQLFSEAVQQHHVSPTAQHFNLLLYIAQQHALWGRVD 57


>UniRef50_O36161 Cluster: T4gp20 homolog; n=286; root|Rep: T4gp20
           homolog - Cyanophage S-PM2
          Length = 564

 Score = 37.1 bits (82), Expect = 0.46
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +3

Query: 414 DARSHYFKEIRKDNLQ---LYKRIVKAKARVQTTAELIEDWKTKHREIEKDTTMLYPYGP 584
           D RSHY K I  DN +   L  R + +  +++   + ++D     +EIEK T + Y YG 
Sbjct: 133 DGRSHYHKVIDLDNPKKGILELRYIDS-LKIRKVRQKLKDVDPNRKEIEKGTALQYDYGD 191

Query: 585 LAEDHAY 605
             E + Y
Sbjct: 192 FIEYYIY 198


>UniRef50_Q2RZ58 Cluster: PPIC-type PPIASE domain protein; n=1;
           Salinibacter ruber DSM 13855|Rep: PPIC-type PPIASE
           domain protein - Salinibacter ruber (strain DSM 13855)
          Length = 342

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 28/126 (22%), Positives = 54/126 (42%)
 Frame = +3

Query: 291 QQNRQIYATNINLLFNIKRQHFLRGKVDCNWLKLPVRPKRHDARSHYFKEIRKDNLQLYK 470
           Q   Q+  T+  L+    RQH LRG+       L V P + +AR    K+  +   Q  K
Sbjct: 84  QSEDQMQETHRQLIRGFARQHALRGEAKAQ--NLEVDPTQVNARLEKLKQRYESEEQFQK 141

Query: 471 RIVKAKARVQTTAELIEDWKTKHREIEKDTTMLYPYGPLAEDHAYISTQRTEATKVYITL 650
           ++ +    V +   L+ D + + +++++     Y   P ++D    S +       +I +
Sbjct: 142 QLARNNMTVDSVRSLLAD-QFRQQQLQRQMAENYE-EPSSDDVTAYSEKNRRIRAQHILI 199

Query: 651 RVREGA 668
           +  E A
Sbjct: 200 KAGENA 205


>UniRef50_Q7VK42 Cluster: Putative uncharacterized protein; n=1;
            Helicobacter hepaticus|Rep: Putative uncharacterized
            protein - Helicobacter hepaticus
          Length = 1086

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = +3

Query: 330  LFNIKRQHFLRGKVDCNWLKLPVRPKRHDARSHYFKEIRKDNLQLYKRIVKAKARVQTTA 509
            L  +K + F+  +     L +P+  K+  A     K I + N+  + + +KA A +    
Sbjct: 901  LSKVKNKEFIADRKKVK-LNIPIPTKQSSANEKLLKAILRSNVDNFHKAIKAGANINEPI 959

Query: 510  ELIEDW 527
            E+IED+
Sbjct: 960  EVIEDY 965


>UniRef50_Q50EY0 Cluster: P-512; n=5; Borrelia|Rep: P-512 - Borrelia
            hermsii
          Length = 2394

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = +3

Query: 303  QIYATNINLLFNIKRQHFLRGKVDCNWLKLPVRPKRHDARSHYFKEIRKDNLQLYKRIVK 482
            ++   +I   F  K    + G +D N  +L ++   +D+  ++F +  KDNL +YK  +K
Sbjct: 2014 KVQVNSIESEFKDKYNFMIEG-IDENVSQLKLKVLNYDSELNHFIDEVKDNLIVYKADLK 2072

Query: 483  AK--ARVQTTAELIEDWKTKHREIEKDTTML 569
             +  +R    +  +E++K    E+EK+  ++
Sbjct: 2073 EELDSRYAVISSKLENFKRLEVELEKNNVLI 2103


>UniRef50_Q23AR6 Cluster: Prenyltransferase and squalene oxidase
           repeat family protein; n=1; Tetrahymena thermophila
           SB210|Rep: Prenyltransferase and squalene oxidase repeat
           family protein - Tetrahymena thermophila SB210
          Length = 420

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 626 FSSLCRNVSVVLRKGPIRIQHCRILFNFTMLSLPVLNKF 510
           F  LC N     +K P+ ++ C +  +F++L L +LNKF
Sbjct: 364 FLKLCENGKGGFKKSPLELEFCPVHTHFSILGLVLLNKF 402


>UniRef50_Q2FXJ2 Cluster: Iron-regulated surface determinant protein
           H precursor; n=33; Staphylococcus aureus|Rep:
           Iron-regulated surface determinant protein H precursor -
           Staphylococcus aureus (strain NCTC 8325)
          Length = 895

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
 Frame = +3

Query: 405 KRHDARSHYFKEIRKDNLQLYKRIVKAKARVQTTAELIEDWKT--KHREIEKDTTMLYPY 578
           K ++ + ++F  I KD   +Y    K KA V+        WK    +   +K    L  Y
Sbjct: 119 KNNETQYYHFFSI-KDPADVY--YTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSY 175

Query: 579 GPLAEDHAYIS---TQRTEATKVYITLRVREG 665
            P+ EDHAYI    +  T+  K+  + ++ +G
Sbjct: 176 SPVPEDHAYIRFPVSDGTQELKIVSSTQIDDG 207


>UniRef50_Q899X8 Cluster: Putative membrane-spanning permease; n=1;
           Clostridium tetani|Rep: Putative membrane-spanning
           permease - Clostridium tetani
          Length = 266

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = -2

Query: 274 LRYIGAELNLGGDVSTTAVMLEYLCVCFRFLCFMVLMISISGG-GDGYFLFKDSLELTFF 98
           +RY G +  L  ++    + + ++ + + FL  ++ ++ +    G   F +K +L   F 
Sbjct: 99  IRYKGYKYWLRSNIKILFLYIIFIFIIYYFLLVIICLLFVKNTTGITDFFYKFNLYENF- 157

Query: 97  NIAFNKVILYIICLN-YCTLNFLL 29
           NI+F K+++Y   +N + TLN +L
Sbjct: 158 NISFYKIVIYQYFINVFLTLNIIL 181


>UniRef50_Q2BI44 Cluster: ATP-dependent helicase HrpB; n=8;
           Gammaproteobacteria|Rep: ATP-dependent helicase HrpB -
           Neptuniibacter caesariensis
          Length = 842

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 19/64 (29%), Positives = 36/64 (56%)
 Frame = +3

Query: 453 NLQLYKRIVKAKARVQTTAELIEDWKTKHREIEKDTTMLYPYGPLAEDHAYISTQRTEAT 632
           +LQL+  +  A+  +Q T +L+  W+  ++E++KD    YP  P  +D   ++ Q T  T
Sbjct: 777 SLQLHL-LSPAQRPLQVTQDLVSFWENGYKEVQKDMKGRYPKHPWPDDP--MTFQPTAKT 833

Query: 633 KVYI 644
           K ++
Sbjct: 834 KRHL 837


>UniRef50_UPI0000E462A1 Cluster: PREDICTED: similar to LOC495937
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to LOC495937 protein -
           Strongylocentrotus purpuratus
          Length = 260

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +3

Query: 510 ELIEDWKTKH-REIEKDTTMLYPYGPLAEDHAYISTQRTEATKVYITLRVREGAVLGVLP 686
           E ++ W  +H   +E     LY    LAE+        T+ T VY  + V +G  +G L 
Sbjct: 86  EALKQWSEQHFNYVEYKPLPLYM--ALAEEAYKEHILATKHTFVYFDVTV-DGEKIGRLL 142

Query: 687 VVLFAECCPQTCKLF 731
             LF + CP+TC+ F
Sbjct: 143 FELFTDQCPRTCENF 157


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,165,425
Number of Sequences: 1657284
Number of extensions: 11893403
Number of successful extensions: 34801
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34775
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)