Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28b10
(743 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3256|AAF49087.1| 720|Drosophila melanogaster CG17732-P... 38 0.019
AY051526-1|AAK92950.1| 404|Drosophila melanogaster GH18016p pro... 32 0.72
AE013599-3874|AAF47207.1| 404|Drosophila melanogaster CG3492-PA... 32 0.72
AY058454-1|AAL13683.1| 560|Drosophila melanogaster GH24674p pro... 31 1.7
AE014298-748|AAN09143.1| 504|Drosophila melanogaster CG3239-PB,... 31 1.7
AE014298-747|AAF46038.2| 560|Drosophila melanogaster CG3239-PA,... 31 1.7
X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein ... 29 6.7
X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein ... 29 6.7
AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-P... 29 6.7
>AE014296-3256|AAF49087.1| 720|Drosophila melanogaster CG17732-PA
protein.
Length = 720
Score = 37.5 bits (83), Expect = 0.019
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 282 QWTQQNRQIYATNINLLFNIKRQHFLRGKVDCNWLKLPVRPKRHDARSHYFKEIRKDNLQ 461
QW QN Y TN N LF+ ++ H + KLP ++H+A ++ KDNLQ
Sbjct: 369 QWNPQNADNY-TNQNQLFHKQQLHIQNQPYLQHHFKLPASQQQHEAIFQQQQQAGKDNLQ 427
Query: 462 ----LYKRI 476
LY+RI
Sbjct: 428 QLRVLYQRI 436
>AY051526-1|AAK92950.1| 404|Drosophila melanogaster GH18016p
protein.
Length = 404
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 633 KVYITLRVREGAVLGVLPVVLFAECCPQTCKLFI 734
++Y+ + VRE + G L + LF E CPQ F+
Sbjct: 247 QIYLDIEVREARIQGRLIIQLFTEACPQVVLEFM 280
>AE013599-3874|AAF47207.1| 404|Drosophila melanogaster CG3492-PA
protein.
Length = 404
Score = 32.3 bits (70), Expect = 0.72
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 633 KVYITLRVREGAVLGVLPVVLFAECCPQTCKLFI 734
++Y+ + VRE + G L + LF E CPQ F+
Sbjct: 247 QIYLDIEVREARIQGRLIIQLFTEACPQVVLEFM 280
>AY058454-1|AAL13683.1| 560|Drosophila melanogaster GH24674p
protein.
Length = 560
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 225 VVDTSPPRFSSAPMYRN-FEQWTQQNRQIYATNINLLFNIKRQHFLRGKVDCNWLKLPVR 401
+V+ + PR P+ ++ F + Q+ Q N N F QHFL GK+ L+L +
Sbjct: 238 LVEKNHPRLKEEPVLQDIFAELKQRFGQKLLANRNN-FTRSTQHFLLGKLKRMRLRLSIL 296
Query: 402 PKRHDARS 425
P+ A+S
Sbjct: 297 PRNSSAQS 304
>AE014298-748|AAN09143.1| 504|Drosophila melanogaster CG3239-PB,
isoform B protein.
Length = 504
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 225 VVDTSPPRFSSAPMYRN-FEQWTQQNRQIYATNINLLFNIKRQHFLRGKVDCNWLKLPVR 401
+V+ + PR P+ ++ F + Q+ Q N N F QHFL GK+ L+L +
Sbjct: 182 LVEKNHPRLKEEPVLQDIFAELKQRFGQKLLANRNN-FTRSTQHFLLGKLKRMRLRLSIL 240
Query: 402 PKRHDARS 425
P+ A+S
Sbjct: 241 PRNSSAQS 248
>AE014298-747|AAF46038.2| 560|Drosophila melanogaster CG3239-PA,
isoform A protein.
Length = 560
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 225 VVDTSPPRFSSAPMYRN-FEQWTQQNRQIYATNINLLFNIKRQHFLRGKVDCNWLKLPVR 401
+V+ + PR P+ ++ F + Q+ Q N N F QHFL GK+ L+L +
Sbjct: 238 LVEKNHPRLKEEPVLQDIFAELKQRFGQKLLANRNN-FTRSTQHFLLGKLKRMRLRLSIL 296
Query: 402 PKRHDARS 425
P+ A+S
Sbjct: 297 PRNSSAQS 304
>X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein
protein.
Length = 1332
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 435 KEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTK 536
+E+R++NLQLY + K R+ + I D K +
Sbjct: 1179 RELRQENLQLYSEKTELKVRIAALEQQIGDLKAQ 1212
>X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein
protein.
Length = 1332
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 435 KEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTK 536
+E+R++NLQLY + K R+ + I D K +
Sbjct: 1179 RELRQENLQLYSEKTELKVRIAALEQQIGDLKAQ 1212
>AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-PA
protein.
Length = 1332
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 435 KEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTK 536
+E+R++NLQLY + K R+ + I D K +
Sbjct: 1179 RELRQENLQLYSEKTELKVRIAALEQQIGDLKAQ 1212
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,736,983
Number of Sequences: 53049
Number of extensions: 568730
Number of successful extensions: 1958
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1954
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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