Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28b09
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    31   0.033
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              27   0.71 

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 31.1 bits (67), Expect = 0.033
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -2

Query: 463 PCTKAKLLPRKLRPIRTERTQQLYSSFRHDSARLVFRPRK 344
           P T+  L P ++   RT R Q L SSFR D  R   +PR+
Sbjct: 56  PVTEDDLFPEEMVKRRTSRLQSLRSSFRTDRDRDPEQPRQ 95


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 26.6 bits (56), Expect = 0.71
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = -3

Query: 513 RREHQRFAPSAYFSQTCRVRKQSFYRESYDQ*EQREPSNYIVLFDTTQQ 367
           +++ Q   P     QT R +     ++   Q +QR+P  Y+V   + QQ
Sbjct: 321 QQQQQSNQPQQQQQQTGRYQPPQMRQQLQQQQQQRQPQRYVVAGSSQQQ 369


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,824
Number of Sequences: 2352
Number of extensions: 13338
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)