Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28b06
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    28   0.062
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.2  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -3

Query: 668 NVNDCINVIIRLGYLVFLRELNPSYAKSRLIRFAFRFEGFHFSPFLSQNLFDCL*ARFIF 489
           N  D  N I  + +L+ +      +       F FRFE   F PFL  N+   +   F+F
Sbjct: 191 NTVDDFNDIFGISFLLIISYSTLHFVNYIDDLFFFRFEKSKFEPFLISNI-SLVSLIFLF 249

Query: 488 IQSIIFLC 465
             ++I +C
Sbjct: 250 NCTLIIMC 257


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +3

Query: 225 LSRNFYKDINIEQHQNYLLKEETEKSSETFIKTNPMCD 338
           LSRN  + + +    ++ L        E F+  +P CD
Sbjct: 5   LSRNDIRFLKVMYKLSHFLSITPNYDFENFVIISPRCD 42


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 219 DILSRNFYKDINIEQHQNYLL 281
           +I+   FYK   IE  Q Y+L
Sbjct: 138 NIMGLEFYKQFAIEYFQMYVL 158


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 219 DILSRNFYKDINIEQHQNYLL 281
           +I+   FYK   IE  Q Y+L
Sbjct: 138 NIMGLEFYKQFAIEYFQMYVL 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,922
Number of Sequences: 336
Number of extensions: 3371
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)