Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28b06
         (688 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0626 + 26233178-26233233,26234083-26234284,26234800-262349...    31   0.86 
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298...    30   2.0  
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600...    29   3.5  
02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,290...    29   4.6  

>03_05_0626 +
           26233178-26233233,26234083-26234284,26234800-26234968,
           26235767-26238768
          Length = 1142

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 429 DGNRGNESVDVTAEKDNALNKYKTRL-EAIKKILREKRAKMKTLESEGKPNKS 584
           DGN G ES+ + A+     N       E +++   E++ K KTL+SEGKP ++
Sbjct: 199 DGN-GGESLSIEAQNYELNNTGSIFTPEELRQQAVEEKKKYKTLKSEGKPEEA 250


>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
            31029955-31030017,31031597-31031704,31031772-31031836,
            31031928-31032015,31032104-31032157,31032234-31032380,
            31033358-31033429,31034077-31034226,31034317-31034430,
            31034762-31034875,31035925-31036077,31037437-31037529,
            31038202-31038318,31038984-31039086,31039192-31039376,
            31039448-31039522,31040451-31040534,31041547-31041588,
            31041668-31041847,31042109-31042162,31042239-31042280,
            31042869-31042967,31043040-31043174,31043325-31043427,
            31045061-31045134,31045227-31045270,31045393-31045471,
            31045592-31045705,31045842-31045946,31046027-31046161,
            31046447-31046546,31046870-31046883,31046936-31047004,
            31047079-31047182,31047299-31047347,31047931-31048023,
            31048102-31048210,31048619-31048755,31048851-31048928,
            31049015-31049104,31049402-31049467,31049546-31049638,
            31049711-31049839,31050024-31050122,31051366-31051512,
            31051605-31051910
          Length = 2050

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 444  NESVDVTAEKDNALNKYKTRLEAIKKILREKRAKMKTLESE 566
            N +     + ++AL  +KT  E IKK L ++  K++T  SE
Sbjct: 997  NSNESALKQMESALQDFKTESETIKKSLEDEITKLRTKISE 1037


>04_04_0076 +
           22558105-22558261,22558356-22558405,22559837-22560044,
           22560112-22560237,22560469-22560567,22560729-22561405,
           22561483-22561731,22561808-22561936,22562021-22562089,
           22562183-22562256,22563086-22563098,22563361-22563468,
           22563541-22563651,22563725-22563811,22564043-22564068,
           22564840-22564906,22565123-22565212,22565295-22565387,
           22565515-22565604,22565699-22565761,22566349-22566447
          Length = 894

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 447 ESVDVTAEKDNALNKYKTRLEAIKKILREKRAKMKTLESEGKPNKS 584
           E + +  EK+     YK +L A    +REK + +K LE   + NK+
Sbjct: 184 EMLRIKQEKEEMDQSYKEQLYASDTTIREKNSLIKQLEDSIEQNKA 229


>02_01_0399 - 2905026-2905406,2905522-2905630,2905809-2907475,
            2907650-2907790,2907870-2908043,2908577-2908851,
            2909592-2909755,2910409-2910536,2910628-2910734,
            2911747-2911880,2912266-2912441,2912530-2914257,
            2915084-2915239,2915328-2915486,2915581-2915751,
            2915931-2916047,2916417-2916473,2916565-2916680,
            2916790-2916916,2917862-2917945
          Length = 2056

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +3

Query: 417  KRPNDGNRGNESVDVTAEKDNALNKYKTRLEAIKKILREKRAKMKTLESEGK 572
            +RP++        D+TAE++  L + +  + +I+KI RE    +K    + K
Sbjct: 1854 RRPDERGPPRRHFDLTAEEEKILGEIEPTVLSIRKIFRESIDSIKLSPEDEK 1905


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,649,849
Number of Sequences: 37544
Number of extensions: 257371
Number of successful extensions: 584
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)