Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28b05
         (742 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    29   0.20 
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   1.9  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.9  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   9.9  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -1

Query: 193  SCFFFYFLKGL*TMISII*SMFFYLKSKIFIAFNMTQQQYSSFTSHNK 50
            S FFF+  K +  +     S F+YL S +   F++  +QY S+  H +
Sbjct: 918  SGFFFHLRKNMGGLKRF--STFYYLISSMETFFDLLDKQYDSYNKHQE 963


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 196 TINFQTFVNSFQNRLEPPVRQHLKNVYATLMM 291
           T  F  +  SF++  E    +H  N+Y ++MM
Sbjct: 435 TFGFYNYPVSFESMFESNRYEHYMNIYGSVMM 466


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 598 PAASFSKHSSSREAYKYQGSAE 533
           P A F++HSSSR A K+ G  E
Sbjct: 415 PRALFARHSSSRLA-KFIGEQE 435


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = -1

Query: 616  CATEE*PAASFSKHSSS--REAYKYQGSAEQSSYYDRWVNYTDIFKQG 479
            C++     ++ S HSSS    A  + G  +Q S+Y  + +   +F  G
Sbjct: 1090 CSSTSSSHSNHSSHSSSSSNSAGSWAGMGKQESHYVMYPSNVPVFAGG 1137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,219
Number of Sequences: 2352
Number of extensions: 16127
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)