Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28b05
(742 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058377-1|AAL13606.1| 245|Drosophila melanogaster GH14327p pro... 105 5e-23
AE014296-1419|AAN12018.1| 237|Drosophila melanogaster CG7188-PB... 105 5e-23
AE014296-1418|AAF50446.1| 245|Drosophila melanogaster CG7188-PA... 105 5e-23
M20231-1|AAA28720.1| 1135|Drosophila melanogaster protein ( D.me... 29 5.0
M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein ( D.me... 29 5.0
J03131-2|AAA28719.1| 1135|Drosophila melanogaster protein ( D.me... 29 5.0
J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein ( D.me... 29 5.0
AY119496-1|AAM50150.1| 1135|Drosophila melanogaster GH10824p pro... 29 5.0
AY069428-1|AAL39573.1| 844|Drosophila melanogaster LD13864p pro... 29 5.0
AE014134-1264|AAF52505.1| 1135|Drosophila melanogaster CG5125-PA... 29 5.0
AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB... 29 5.0
AE013599-91|AAF57324.2| 844|Drosophila melanogaster CG8426-PA p... 29 5.0
>AY058377-1|AAL13606.1| 245|Drosophila melanogaster GH14327p
protein.
Length = 245
Score = 105 bits (253), Expect = 5e-23
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +2
Query: 296 ASLHLLGFMLMFTRF-QAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 472
A+ +G ML F G L+A+ L+L L D+GKN RLG L FG SG +
Sbjct: 42 AAATAMGAMLQMRDFLDLGVLAAVATLVLVLGLHFYKDDGKNYYTRLGMLYAFGFCSGQT 101
Query: 473 MGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAMLAERGSWXXXXXXXXXXXXSMSLMT 652
+GPLL Y+ ++P+II++AL GT + F+ S +A+LAE+G + +M+L++
Sbjct: 102 LGPLLGYICSINPAIILSALTGTFVTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLS 161
Query: 653 LVNLFMQSHFLYQAHLYLGLMLMCGFVLFD 742
L N+ +S+F+ LY+G+ +M F+++D
Sbjct: 162 LFNMVFKSYFVQVTQLYVGVFVMAAFIVYD 191
Score = 39.5 bits (88), Expect = 0.005
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 193 NTIN--FQTFVNSFQNRLEPPVRQHLKNVYATLMMTCVSASAGVYVDV 330
N IN FQTF+N +R EP VR+HL VY L T + + G + +
Sbjct: 6 NYINDRFQTFMNGLGDRYEPYVREHLSKVYMVLGSTAAATAMGAMLQM 53
>AE014296-1419|AAN12018.1| 237|Drosophila melanogaster CG7188-PB,
isoform B protein.
Length = 237
Score = 105 bits (253), Expect = 5e-23
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +2
Query: 296 ASLHLLGFMLMFTRF-QAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 472
A+ +G ML F G L+A+ L+L L D+GKN RLG L FG SG +
Sbjct: 42 AAATAMGAMLQMRDFLDLGVLAAVATLVLVLGLHFYKDDGKNYYTRLGMLYAFGFCSGQT 101
Query: 473 MGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAMLAERGSWXXXXXXXXXXXXSMSLMT 652
+GPLL Y+ ++P+II++AL GT + F+ S +A+LAE+G + +M+L++
Sbjct: 102 LGPLLGYICSINPAIILSALTGTFVTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLS 161
Query: 653 LVNLFMQSHFLYQAHLYLGLMLMCGFVLFD 742
L N+ +S+F+ LY+G+ +M F+++D
Sbjct: 162 LFNMVFKSYFVQVTQLYVGVFVMAAFIVYD 191
Score = 39.5 bits (88), Expect = 0.005
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 193 NTIN--FQTFVNSFQNRLEPPVRQHLKNVYATLMMTCVSASAGVYVDV 330
N IN FQTF+N +R EP VR+HL VY L T + + G + +
Sbjct: 6 NYINDRFQTFMNGLGDRYEPYVREHLSKVYMVLGSTAAATAMGAMLQM 53
>AE014296-1418|AAF50446.1| 245|Drosophila melanogaster CG7188-PA,
isoform A protein.
Length = 245
Score = 105 bits (253), Expect = 5e-23
Identities = 54/150 (36%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +2
Query: 296 ASLHLLGFMLMFTRF-QAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 472
A+ +G ML F G L+A+ L+L L D+GKN RLG L FG SG +
Sbjct: 42 AAATAMGAMLQMRDFLDLGVLAAVATLVLVLGLHFYKDDGKNYYTRLGMLYAFGFCSGQT 101
Query: 473 MGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAMLAERGSWXXXXXXXXXXXXSMSLMT 652
+GPLL Y+ ++P+II++AL GT + F+ S +A+LAE+G + +M+L++
Sbjct: 102 LGPLLGYICSINPAIILSALTGTFVTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLS 161
Query: 653 LVNLFMQSHFLYQAHLYLGLMLMCGFVLFD 742
L N+ +S+F+ LY+G+ +M F+++D
Sbjct: 162 LFNMVFKSYFVQVTQLYVGVFVMAAFIVYD 191
Score = 39.5 bits (88), Expect = 0.005
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 193 NTIN--FQTFVNSFQNRLEPPVRQHLKNVYATLMMTCVSASAGVYVDV 330
N IN FQTF+N +R EP VR+HL VY L T + + G + +
Sbjct: 6 NYINDRFQTFMNGLGDRYEPYVREHLSKVYMVLGSTAAATAMGAMLQM 53
>M20231-1|AAA28720.1| 1135|Drosophila melanogaster protein (
D.melanogaster ninaCencoded short protein mRNA, complete
cds. ).
Length = 1135
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 335 RFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 472
R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 450 RGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein (
D.melanogaster ninaCencoded long protein mRNA, complete
cds. ).
Length = 1501
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 335 RFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 472
R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 450 RGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>J03131-2|AAA28719.1| 1135|Drosophila melanogaster protein (
D.melanogaster ninaCprotein genes, complete cds. ).
Length = 1135
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 335 RFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 472
R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 450 RGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein (
D.melanogaster ninaCprotein genes, complete cds. ).
Length = 1501
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 335 RFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 472
R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 450 RGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>AY119496-1|AAM50150.1| 1135|Drosophila melanogaster GH10824p
protein.
Length = 1135
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 335 RFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 472
R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 450 RGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>AY069428-1|AAL39573.1| 844|Drosophila melanogaster LD13864p
protein.
Length = 844
Score = 29.5 bits (63), Expect = 5.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -2
Query: 645 SDIDVNSVIN-VPPRNSQ-LPRSASIAAAEKHTNTRVVPSRAVIMIDGSTTLTYSSRGPM 472
SD VN +++ P +N Q LP +ASI A + + S + G++ S P
Sbjct: 383 SDTQVNKIVSSTPSKNQQQLPTAASIVATSAMQSQSSIGSCSSTGGTGASQSASSGNNPG 442
Query: 471 LMPDVNPN 448
P V PN
Sbjct: 443 NNPAVQPN 450
>AE014134-1264|AAF52505.1| 1135|Drosophila melanogaster CG5125-PA,
isoform A protein.
Length = 1135
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 335 RFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 472
R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 450 RGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB,
isoform B protein.
Length = 1501
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 335 RFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMS 472
R G + + + A LML+ TP N +T L Y L FG T MS
Sbjct: 450 RGATGRVESSIKAILMLVNAGTPVNNDSTRCVLQYCLTFGKTGKMS 495
>AE013599-91|AAF57324.2| 844|Drosophila melanogaster CG8426-PA
protein.
Length = 844
Score = 29.5 bits (63), Expect = 5.0
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -2
Query: 645 SDIDVNSVIN-VPPRNSQ-LPRSASIAAAEKHTNTRVVPSRAVIMIDGSTTLTYSSRGPM 472
SD VN +++ P +N Q LP +ASI A + + S + G++ S P
Sbjct: 383 SDTQVNKIVSSTPSKNQQQLPTAASIVATSAMQSQSSIGSCSSTGGTGASQSASSGNNPG 442
Query: 471 LMPDVNPN 448
P V PN
Sbjct: 443 NNPAVQPN 450
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,889,854
Number of Sequences: 53049
Number of extensions: 670760
Number of successful extensions: 1852
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1852
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -