Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28b01
(741 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6PW85 Cluster: Leprecan 1; n=8; Euteleostomi|Rep: Lepr... 35 2.4
UniRef50_Q3V1T4 Cluster: Prolyl 3-hydroxylase 1 precursor; n=24;... 35 2.4
UniRef50_Q2JIE3 Cluster: DNA-binding response regulator; n=14; C... 34 4.2
UniRef50_Q5S233 Cluster: Mitochondrial associated cysteine-rich ... 33 5.6
UniRef50_Q5BZV4 Cluster: SJCHGC01027 protein; n=2; Schistosoma j... 33 5.6
UniRef50_UPI0000EBDE4C Cluster: PREDICTED: similar to keratin as... 33 7.4
UniRef50_A6QWD9 Cluster: Predicted protein; n=3; Eurotiomycetida... 33 7.4
UniRef50_Q3JTA3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_Q32P28 Cluster: Prolyl 3-hydroxylase 1 precursor; n=11;... 33 9.7
>UniRef50_A6PW85 Cluster: Leprecan 1; n=8; Euteleostomi|Rep:
Leprecan 1 - Mus musculus (Mouse)
Length = 560
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -3
Query: 691 CESTEVSFFRNDNKGYPG----SVIMSAHDC*PVHPQNGNDEPRRRDQLDKKFLRRAYDA 524
C T + FF ND + + ++ + + P+ +E RRR L+K+ L AYD
Sbjct: 147 CAKTYLLFFPNDEVMHQNLAYYTAMLGEEEASSISPRENAEEYRRRSLLEKELLFFAYDI 206
Query: 523 HGLP 512
G+P
Sbjct: 207 FGIP 210
>UniRef50_Q3V1T4 Cluster: Prolyl 3-hydroxylase 1 precursor; n=24;
Euteleostomi|Rep: Prolyl 3-hydroxylase 1 precursor - Mus
musculus (Mouse)
Length = 739
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -3
Query: 691 CESTEVSFFRNDNKGYPG----SVIMSAHDC*PVHPQNGNDEPRRRDQLDKKFLRRAYDA 524
C T + FF ND + + ++ + + P+ +E RRR L+K+ L AYD
Sbjct: 326 CAKTYLLFFPNDEVMHQNLAYYTAMLGEEEASSISPRENAEEYRRRSLLEKELLFFAYDI 385
Query: 523 HGLP 512
G+P
Sbjct: 386 FGIP 389
>UniRef50_Q2JIE3 Cluster: DNA-binding response regulator; n=14;
Cyanobacteria|Rep: DNA-binding response regulator -
Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 269
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -3
Query: 565 DQLDKKFLRRAYDAHGLPLPPRRRASLEPLADQYGRLRID 446
D L K F + DAH L L RR+ + P QYG L+ID
Sbjct: 99 DYLTKPFSMQLLDAHLLALARRRQRHIPPTFLQYGDLKID 138
>UniRef50_Q5S233 Cluster: Mitochondrial associated cysteine-rich
protein; n=1; Sus scrofa|Rep: Mitochondrial associated
cysteine-rich protein - Sus scrofa (Pig)
Length = 104
Score = 33.5 bits (73), Expect = 5.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +1
Query: 148 PTRCEESPTCYPCLPHCPQSMVYCCDTRPKTPLRRSSCC 264
P C P C P P C CC +P+ +++ CC
Sbjct: 15 PECCPPKPQCCPPKPQCCPPKPQCCPPKPQCCTQQTCCC 53
>UniRef50_Q5BZV4 Cluster: SJCHGC01027 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01027 protein - Schistosoma
japonicum (Blood fluke)
Length = 381
Score = 33.5 bits (73), Expect = 5.6
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 178 YPCLPHC-PQSMVYCCDTRPKTPLRRSSCCDSKE 276
YP P C P S YCC P TP+RR D+ E
Sbjct: 5 YPIPPMCLPPSGNYCCSHTPPTPIRRPWLGDNSE 38
>UniRef50_UPI0000EBDE4C Cluster: PREDICTED: similar to keratin
associated protein 9.2; n=1; Bos taurus|Rep: PREDICTED:
similar to keratin associated protein 9.2 - Bos taurus
Length = 230
Score = 33.1 bits (72), Expect = 7.4
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 103 CGPFAVAPVLVTSS-YPTRCEESPTCYPCLPHCPQSMVYCCDTRPKTPLRRSSCC 264
C + P+ VT+ PT CE S C C P CPQ+ +T P +SCC
Sbjct: 28 CRTTCLKPICVTTCCQPTCCESS--C--CQPSCPQTCCQITETTCCKPTCVTSCC 78
>UniRef50_A6QWD9 Cluster: Predicted protein; n=3;
Eurotiomycetidae|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 577
Score = 33.1 bits (72), Expect = 7.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 221 QQ*TIDCGQCGKHG*HVGDSSHLVGYE 141
+Q T DC CG HG ++ D SH+V E
Sbjct: 442 EQWTFDCSGCGVHGENLDDGSHIVACE 468
>UniRef50_Q3JTA3 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 621
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 493 RACEVAAGVRGRRKPFVETSYRADPYDEVHRYHSEDEQ 606
R + A G RR VET RA P D +HR+H++ ++
Sbjct: 233 RRADFARGDPARRGSAVETRPRARPVDRLHRHHADRDR 270
>UniRef50_Q32P28 Cluster: Prolyl 3-hydroxylase 1 precursor; n=11;
Tetrapoda|Rep: Prolyl 3-hydroxylase 1 precursor - Homo
sapiens (Human)
Length = 736
Score = 32.7 bits (71), Expect = 9.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = -3
Query: 691 CESTEVSFFRND-----NKGYPGSVIMSAHDC*PVHPQNGNDEPRRRDQLDKKFLRRAYD 527
C T + FF ND N Y +++ H + P+ E R+R L+K+ L AYD
Sbjct: 323 CAKTYLLFFPNDEVMNQNLAYYAAMLGEEHTR-SIGPRESAKEYRQRSLLEKELLFFAYD 381
Query: 526 AHGLP 512
G+P
Sbjct: 382 VFGIP 386
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,577,706
Number of Sequences: 1657284
Number of extensions: 13772242
Number of successful extensions: 40068
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40028
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -