Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28a23
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97189-8|AAK68256.1|   61|Caenorhabditis elegans Hypothetical pr...    33   0.15 
U41746-8|AAO25991.1|  430|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U41746-7|AAK71873.1|  803|Caenorhabditis elegans Hypothetical pr...    29   2.5  

>U97189-8|AAK68256.1|   61|Caenorhabditis elegans Hypothetical
           protein C48B6.10 protein.
          Length = 61

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 183 MVDLSGGSDGPLEHAFSNTVFIIPGIIFVSLSVFFGYKL 299
           MV+L G   GP   +F N+VFIIP I+ V++  +   KL
Sbjct: 1   MVELGG--KGPYSTSFDNSVFIIPAIVIVAVFAYAVIKL 37


>U41746-8|AAO25991.1|  430|Caenorhabditis elegans Hypothetical
           protein T18H9.7c protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 232 ENACSKGPSEPPLRSTILIIASKLFVSKVISRYVVC 125
           +N C    S PPL    +I   KLF S+V+  YV C
Sbjct: 83  QNFCHSNSSNPPLTIVGIIGTDKLF-SQVVKAYVEC 117


>U41746-7|AAK71873.1|  803|Caenorhabditis elegans Hypothetical
           protein T18H9.7a protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 232 ENACSKGPSEPPLRSTILIIASKLFVSKVISRYVVC 125
           +N C    S PPL    +I   KLF S+V+  YV C
Sbjct: 456 QNFCHSNSSNPPLTIVGIIGTDKLF-SQVVKAYVEC 490


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,231,258
Number of Sequences: 27780
Number of extensions: 238546
Number of successful extensions: 532
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)