Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28a22
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534241-1|AAT07090.1|  650|Homo sapiens XK-related protein 4 pr...    30   6.7  
AB067476-1|BAB67782.1|  505|Homo sapiens KIAA1889 protein protein.     30   6.7  
X51591-1|CAA35940.1| 1151|Homo sapiens beta-myosin heavy chain (...    30   8.9  
L14565-1|AAA60190.1|  471|Homo sapiens peripherin protein.             30   8.9  
BC032703-1|AAH32703.1|  470|Homo sapiens peripherin protein.           30   8.9  

>AY534241-1|AAT07090.1|  650|Homo sapiens XK-related protein 4
           protein.
          Length = 650

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +1

Query: 259 VNYVVCLMCFCWHFFGNSHTSKIITYLLIIGAY 357
           ++Y+  ++ FCWHFF  +  +++IT+ L    +
Sbjct: 367 ISYMAVIIQFCWHFF--TIAARVITFALFASVF 397


>AB067476-1|BAB67782.1|  505|Homo sapiens KIAA1889 protein protein.
          Length = 505

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +1

Query: 259 VNYVVCLMCFCWHFFGNSHTSKIITYLLIIGAY 357
           ++Y+  ++ FCWHFF  +  +++IT+ L    +
Sbjct: 222 ISYMAVIIQFCWHFF--TIAARVITFALFASVF 252


>X51591-1|CAA35940.1| 1151|Homo sapiens beta-myosin heavy chain
           (1151 AA) protein.
          Length = 1151

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 19/72 (26%), Positives = 35/72 (48%)
 Frame = +2

Query: 473 SEKEEKELVKKRASLKGRLTTFRKYIEELSGTLNQQQVNELQLRIGKIELLFEQYDVVQT 652
           ++K++ E   K+   +      R   E+  G+  Q+++ ELQ RI ++E   E     + 
Sbjct: 287 NDKQQLEERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARA 346

Query: 653 KIECLADDFSSQ 688
           K+E L  D S +
Sbjct: 347 KVEKLRSDLSRE 358


>L14565-1|AAA60190.1|  471|Homo sapiens peripherin protein.
          Length = 471

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 20/64 (31%), Positives = 37/64 (57%)
 Frame = +2

Query: 494 LVKKRASLKGRLTTFRKYIEELSGTLNQQQVNELQLRIGKIELLFEQYDVVQTKIECLAD 673
           L ++ A+L+G L+  R      +  L QQ++ EL+    ++ELL  + D VQ + + LA+
Sbjct: 118 LEQQNAALRGELSQARGQEPARADQLCQQELRELR---RELELLGRERDRVQVERDGLAE 174

Query: 674 DFSS 685
           D ++
Sbjct: 175 DLAA 178


>BC032703-1|AAH32703.1|  470|Homo sapiens peripherin protein.
          Length = 470

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 20/64 (31%), Positives = 37/64 (57%)
 Frame = +2

Query: 494 LVKKRASLKGRLTTFRKYIEELSGTLNQQQVNELQLRIGKIELLFEQYDVVQTKIECLAD 673
           L ++ A+L+G L+  R      +  L QQ++ EL+    ++ELL  + D VQ + + LA+
Sbjct: 118 LEQQNAALRGELSQARGQEPARADQLCQQELRELR---RELELLGRERDRVQVERDGLAE 174

Query: 674 DFSS 685
           D ++
Sbjct: 175 DLAA 178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,721,862
Number of Sequences: 237096
Number of extensions: 1550524
Number of successful extensions: 2839
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2836
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)