Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28a20
(753 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr 1||... 91 1e-19
SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 36 0.008
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 3.8
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 27 3.8
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 27 3.8
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb... 26 6.6
SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 26 6.6
SPBC1861.06c |mug131||S. pombe specific UPF0300 family protein 4... 25 8.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 8.8
>SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 224
Score = 91.5 bits (217), Expect = 1e-19
Identities = 48/130 (36%), Positives = 69/130 (53%)
Frame = +2
Query: 281 TATVIFFHGSGSTGADIKEWVRLMVEQFSFPHVKVLFPTAPLQPYTPAGGMMSNVWFDRA 460
TATVIF HG G +G + W + +F H+K +FP AP P T GM W+D
Sbjct: 17 TATVIFLHGLGDSG---QGWSFMANTWSNFKHIKWIFPNAPSIPVTVNNGMKMPAWYDIY 73
Query: 461 NITPDVPEKLDSLARIETEVKNLIKTENDAGIPSDRIIVGGFSMGGALAFHTGYRWDRKL 640
+ E + + R ++ LI E GIPSDRI++GGFS G ++ + G + ++L
Sbjct: 74 SFADMKREDENGILRSAGQLHELIDAELALGIPSDRILIGGFSQGCMVSLYAGLTYPKRL 133
Query: 641 AGVFAFSSFL 670
AG+ S FL
Sbjct: 134 AGIMGHSGFL 143
>SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 241
Score = 35.5 bits (78), Expect = 0.008
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 5/132 (3%)
Frame = +2
Query: 290 VIFFHGSGSTGADIKEWVRLMVEQFSFPHVKVLFP-TAPLQPYTPAGGMM--SNVWFDRA 460
VI HG G + + V + ++ + P PL P G M +V FD+
Sbjct: 27 VILMHGLGDSHKSFANMAK-NVPLPNTSYISLRGPYRLPLDFENPGGNWMWGEDVHFDQN 85
Query: 461 NITPDVPEKLDSLARIETEVKNLIKTENDAGIPSDRIIVGGFSMGGALAFHTGYRWDRK- 637
++ + D ++ T + NLI GI S RI GF G +A ++ Y+ K
Sbjct: 86 G---ELQSEAD-FSKSFTMISNLIGNLLSYGILSSRIFFFGFGQGAMVALYSCYKLSTKY 141
Query: 638 -LAGVFAFSSFL 670
L G+F+F L
Sbjct: 142 QLGGIFSFGGTL 153
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 137 YDQKKELSIPNYI**IRTYLPETSITINFNKMSKLGAL 250
YD ++ P Y+ ++TY PE I F+ S L L
Sbjct: 1861 YDTPAKIVTPVYVSILKTYQPEVRAFIEFSLASLLSVL 1898
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 650 TPQPVF-YPICSQCEKPVH 597
+PQ F Y IC CE+P+H
Sbjct: 126 SPQSNFMYAICDHCEQPIH 144
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 26.6 bits (56), Expect = 3.8
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +2
Query: 533 KTENDAGIPSDRIIVGGFSMGGALAFHTGYRWDRKLAGVFAFSSFLNYNSAVYDELK 703
KT +PS ++ GG GG LAF K FS L + S VY LK
Sbjct: 142 KTTECIPVPSFNVLNGGRHAGGDLAFQEFMIMPIKAP---TFSEGLRWGSEVYHTLK 195
>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +2
Query: 563 DRIIVGGFSMGGALAFHTGYRWDRKLAGVFAFSSFLNYNSAVYDELKNNTGVTYPPLLQI 742
D+ + G SMG A T +W K+ + NS Y +L + G + ++QI
Sbjct: 87 DKASIIGHSMGAKTAMVTALKWPDKVEKLVVVD-----NSPWYQDLPRDYGAYFRKMIQI 141
>SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1136
Score = 25.8 bits (54), Expect = 6.6
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 203 TSITINFNKMSKLGALHITKHSGA---KQTATVIFFHGSGSTGADIKEWVRLMVEQF 364
+S ++ NK+ K GAL I++ A +T+ S TG D E+ RL+ ++
Sbjct: 446 SSSQVSKNKLDKFGALTISELKNAVLSSIVSTIQIEPNSDLTGYDYYEYKRLLYNEW 502
>SPBC1861.06c |mug131||S. pombe specific UPF0300 family protein
4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 8.8
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 632 RKLAGVFAFSSFLNYNSAVYDE 697
RK +F ++LN+N+ +Y+E
Sbjct: 326 RKKGAIFPIHAYLNFNAKLYEE 347
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.4 bits (53), Expect = 8.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -3
Query: 661 AECKHPSQFSIPSVASVKSQCTSHGKSTNYNPITGYSSIIFSFYKILYFSFNS 503
AE PS+ + PS++ Q +S +++ NP SS + SF + SF +
Sbjct: 3792 AELPTPSRMTSPSLSETIPQSSSISEASTSNP-NILSSTVLSFDSTITNSFTT 3843
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,289,864
Number of Sequences: 5004
Number of extensions: 71286
Number of successful extensions: 208
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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