Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28a20
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-3|CAB00042.2| 223|Caenorhabditis elegans Hypothetical pr... 87 1e-17
AY691524-1|AAU01163.1| 213|Caenorhabditis elegans acyl protein ... 85 5e-17
AY691523-1|AAU01162.1| 213|Caenorhabditis elegans acyl protein ... 85 5e-17
Z92829-6|CAB07346.1| 214|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF101319-1|AAC69354.2| 334|Caenorhabditis elegans Hypothetical ... 29 3.5
Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF025452-8|AAB70940.1| 324|Caenorhabditis elegans Serpentine re... 29 4.7
U41274-2|AAD50512.1| 347|Caenorhabditis elegans Intracellular l... 28 8.2
>Z75712-3|CAB00042.2| 223|Caenorhabditis elegans Hypothetical
protein K04G2.5 protein.
Length = 223
Score = 87.4 bits (207), Expect = 1e-17
Identities = 48/127 (37%), Positives = 63/127 (49%)
Frame = +2
Query: 287 TVIFFHGSGSTGADIKEWVRLMVEQFSFPHVKVLFPTAPLQPYTPAGGMMSNVWFDRANI 466
T+IF HG G G W + ++K + P + +P T GM WFD +
Sbjct: 21 TLIFLHGLGDQGHG---WADAFKTEAKHDNIKFICPHSSERPVTLNMGMRMPAWFDLFGL 77
Query: 467 TPDVPEKLDSLARIETEVKNLIKTENDAGIPSDRIIVGGFSMGGALAFHTGYRWDRKLAG 646
P+ E + R V LI E AGIP+ RI VGGFSMGGALA + G + +KL G
Sbjct: 78 DPNAQEDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLGG 137
Query: 647 VFAFSSF 667
+ SSF
Sbjct: 138 IVGLSSF 144
>AY691524-1|AAU01163.1| 213|Caenorhabditis elegans acyl protein
thioesterase 1 protein.
Length = 213
Score = 85.0 bits (201), Expect = 5e-17
Identities = 47/126 (37%), Positives = 62/126 (49%)
Frame = +2
Query: 287 TVIFFHGSGSTGADIKEWVRLMVEQFSFPHVKVLFPTAPLQPYTPAGGMMSNVWFDRANI 466
T+IF HG G G W + ++K + P + +P T GM WFD +
Sbjct: 21 TLIFLHGLGDQGHG---WADAFKTEAKHDNIKFICPHSSERPVTLNMGMRMPAWFDLFGL 77
Query: 467 TPDVPEKLDSLARIETEVKNLIKTENDAGIPSDRIIVGGFSMGGALAFHTGYRWDRKLAG 646
P+ E + R V LI E AGIP+ RI VGGFSMGGALA + G + +KL G
Sbjct: 78 DPNAQEDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLGG 137
Query: 647 VFAFSS 664
+ SS
Sbjct: 138 IVGLSS 143
>AY691523-1|AAU01162.1| 213|Caenorhabditis elegans acyl protein
thioesterase 1 protein.
Length = 213
Score = 85.0 bits (201), Expect = 5e-17
Identities = 47/126 (37%), Positives = 62/126 (49%)
Frame = +2
Query: 287 TVIFFHGSGSTGADIKEWVRLMVEQFSFPHVKVLFPTAPLQPYTPAGGMMSNVWFDRANI 466
T+IF HG G G W + ++K + P + +P T GM WFD +
Sbjct: 21 TLIFLHGLGDQGHG---WADAFKTEAKHDNIKFICPHSSERPVTLNMGMRMPAWFDLFGL 77
Query: 467 TPDVPEKLDSLARIETEVKNLIKTENDAGIPSDRIIVGGFSMGGALAFHTGYRWDRKLAG 646
P+ E + R V LI E AGIP+ RI VGGFSMGGALA + G + +KL G
Sbjct: 78 DPNAQEDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLGG 137
Query: 647 VFAFSS 664
+ SS
Sbjct: 138 IVGLSS 143
>Z92829-6|CAB07346.1| 214|Caenorhabditis elegans Hypothetical
protein F10A3.7 protein.
Length = 214
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 565 ITGYSSIIFSFYKILYFSFNSG**VQFFRNIWCNISSIKPNIAHHTT 425
I+ S +F YK L FSF+S V F N WC I +I +++
Sbjct: 32 ISKMSKQMFGNYKYLMFSFSSFTIVYSFVNFWCKPVVINVHITENSS 78
>AF101319-1|AAC69354.2| 334|Caenorhabditis elegans Hypothetical
protein K08D9.4 protein.
Length = 334
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +2
Query: 227 KMSKLGALHITKHSGAKQTATVIFFHGSGSTGADIKEWVRLMVEQFSFPHVKVLFP---T 397
++ L A++ S TVI FHG+ + D K +VR +E + + + +P
Sbjct: 54 RLVDLNAVYEDSLSSGSPLGTVIGFHGTPGSHRDFK-YVRQRLEHMNIRFIGINYPGFKQ 112
Query: 398 APLQPYTPAGGMMSNVWFDRANITPDVPEKL 490
P P G N + + DVP K+
Sbjct: 113 TPAYPGQHFGNWERNSYSEALLNELDVPGKV 143
>Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical
protein B0464.9 protein.
Length = 364
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 509 ETEVKNLIKT-ENDAGIPSDRIIVGGFSMGGALAFHT 616
ET++K++ +N G + + G SMGGALA HT
Sbjct: 137 ETQIKDIGAIFKNIFGEDDSPVCIVGHSMGGALAIHT 173
>AF025452-8|AAB70940.1| 324|Caenorhabditis elegans Serpentine
receptor, class i protein31 protein.
Length = 324
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -2
Query: 737 AARVDMLHLCYFSIHHKRLNYNLRRS*MQTPQPVFYPIC 621
+ ++++L +C+F HH + LR + + P P+ Y +C
Sbjct: 104 SGQIEVLTICFFRKHHAIM--KLRPTTDKVPYPIIYVLC 140
>U41274-2|AAD50512.1| 347|Caenorhabditis elegans Intracellular
lectin protein 2 protein.
Length = 347
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +2
Query: 122 YNLIKYDQKKELSIPNYI**IRTYLPETSITINFNKMSKLGALHITKHSGAKQTATVIFF 301
++LIK IPN+ T++ I + ++ SK GAL T+ ++ + F
Sbjct: 49 HSLIKPYTGSGADIPNWNIIGSTFVSSNQIRLTADEQSKAGALWNTQPVWSRDWELQVSF 108
Query: 302 HGSGSTG 322
+GSTG
Sbjct: 109 KVTGSTG 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,967,405
Number of Sequences: 27780
Number of extensions: 393301
Number of successful extensions: 1141
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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