Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28a19
(357 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein. 33 0.20
BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein. 33 0.20
BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein. 33 0.20
AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and chloride-ac... 33 0.20
AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel, subf... 33 0.20
AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel, subf... 33 0.20
AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel, subf... 33 0.20
AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel, subf... 33 0.20
AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel, subf... 33 0.20
AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel, subf... 33 0.20
AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel, subf... 33 0.20
AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel, subf... 33 0.20
AL158822-4|CAI39240.1| 1315|Homo sapiens potassium channel, subf... 29 3.2
AB037843-1|BAA92660.1| 1151|Homo sapiens KIAA1422 protein protein. 29 3.2
BC067105-1|AAH67105.1| 329|Homo sapiens tetraspanin 17 protein. 29 4.2
BC010405-1|AAH10405.1| 263|Homo sapiens TSPAN17 protein protein. 29 4.2
AF174603-1|AAF04524.1| 123|Homo sapiens F-box protein Fbx23 pro... 29 4.2
>BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein.
Length = 1111
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein.
Length = 1068
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein.
Length = 1111
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and
chloride-activated ATP-sensitive potassium channel
protein.
Length = 1135
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 339 LNEPSILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
L P IL IN VPF+ I I W + F V+++ W + EN++ +RA
Sbjct: 136 LRIPFILEIINAVPFI--ISIFWPSLRNLFVPVFLNCWLAKHALENMINDLHRA 187
>AL158822-4|CAI39240.1| 1315|Homo sapiens potassium channel,
subfamily T, member 1 protein.
Length = 1315
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 324 ILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
+L IN +PF+ I I W + F V+++ W + EN++ ++RA
Sbjct: 279 VLEMINTLPFI--ITIFWPPLRNLFIPVFLNCWLAKHALENMINDFHRA 325
>AB037843-1|BAA92660.1| 1151|Homo sapiens KIAA1422 protein protein.
Length = 1151
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 324 ILHFINYVPFLHFIKIKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRA 178
+L IN +PF+ I I W + F V+++ W + EN++ ++RA
Sbjct: 235 VLEMINTLPFI--ITIFWPPLRNLFIPVFLNCWLAKHALENMINDFHRA 281
>BC067105-1|AAH67105.1| 329|Homo sapiens tetraspanin 17 protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 100 FEIGYSITFWVIFLFFCKRGMWLKLEFGLLT 8
F G++I FWV+ F G+W E G+L+
Sbjct: 20 FLFGFNIVFWVLGALFLAIGLWAWGEKGVLS 50
>BC010405-1|AAH10405.1| 263|Homo sapiens TSPAN17 protein protein.
Length = 263
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 100 FEIGYSITFWVIFLFFCKRGMWLKLEFGLLT 8
F G++I FWV+ F G+W E G+L+
Sbjct: 20 FLFGFNIVFWVLGALFLAIGLWAWGEKGVLS 50
>AF174603-1|AAF04524.1| 123|Homo sapiens F-box protein Fbx23
protein.
Length = 123
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 100 FEIGYSITFWVIFLFFCKRGMWLKLEFGLLT 8
F G++I FWV+ F G+W E G+L+
Sbjct: 32 FLFGFNIVFWVLGALFLAIGLWAWGEKGVLS 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,122,551
Number of Sequences: 237096
Number of extensions: 990701
Number of successful extensions: 2002
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1991
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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