Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28a19
         (357 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L41807-1|AAA67369.1|  402|Caenorhabditis elegans fatty acid desa...    28   2.2  
AL132951-8|CAC44309.1|  402|Caenorhabditis elegans Hypothetical ...    28   2.2  
Z77663-18|CAC70092.2|  191|Caenorhabditis elegans Hypothetical p...    27   3.9  
Z77654-6|CAB01128.3|  191|Caenorhabditis elegans Hypothetical pr...    27   3.9  
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p...    27   5.1  
AF251126-1|AAF71273.1|  487|Caenorhabditis elegans UDP-GlcNAc:a-...    27   5.1  
U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical pr...    26   6.7  
AF025458-3|AAB70976.1|  612|Caenorhabditis elegans Hypothetical ...    26   6.7  
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr...    26   8.9  
Z78059-4|CAB01487.2|  995|Caenorhabditis elegans Hypothetical pr...    26   8.9  
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.     26   8.9  
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.     26   8.9  
AF047659-11|AAC04428.1|  182|Caenorhabditis elegans Hypothetical...    26   8.9  

>L41807-1|AAA67369.1|  402|Caenorhabditis elegans fatty acid
           desaturase protein.
          Length = 402

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 86  ITNFKYKMNIFRGLVILYMSLFVLIYFGFVGALLY 190
           + + +Y +  F  L ILY +L    YFG  G L++
Sbjct: 73  VKSIRYLVQDFAALTILYFALPAFEYFGLFGYLVW 107


>AL132951-8|CAC44309.1|  402|Caenorhabditis elegans Hypothetical
           protein Y67H2A.8 protein.
          Length = 402

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 86  ITNFKYKMNIFRGLVILYMSLFVLIYFGFVGALLY 190
           + + +Y +  F  L ILY +L    YFG  G L++
Sbjct: 73  VKSIRYLVQDFAALTILYFALPAFEYFGLFGYLVW 107


>Z77663-18|CAC70092.2|  191|Caenorhabditis elegans Hypothetical
           protein C50B8.5 protein.
          Length = 191

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +2

Query: 38  HSALTKKQKNNPKCNTITNFKYKMNIFRGLVILYMSLFVLIYFGFVGALLY 190
           H  +  +Q N+ + N   N K  +     L +L + L VLI  G VG LLY
Sbjct: 45  HVNMVVRQVNDVQNNV--NSKLTLFPSEWLYLLVLMLIVLILLGLVGYLLY 93


>Z77654-6|CAB01128.3|  191|Caenorhabditis elegans Hypothetical
           protein C50B8.5 protein.
          Length = 191

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +2

Query: 38  HSALTKKQKNNPKCNTITNFKYKMNIFRGLVILYMSLFVLIYFGFVGALLY 190
           H  +  +Q N+ + N   N K  +     L +L + L VLI  G VG LLY
Sbjct: 45  HVNMVVRQVNDVQNNV--NSKLTLFPSEWLYLLVLMLIVLILLGLVGYLLY 93


>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
           protein C06A5.1 protein.
          Length = 1932

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -1

Query: 195 LTYNRAPTKPKYISTNSDMYRITRPLKMFILYLKLVI 85
           LT   A   PK I+TN  + RIT P K+   YLK+ I
Sbjct: 652 LTQRAALFHPK-ITTNP-LIRITEPFKLIDSYLKMTI 686


>AF251126-1|AAF71273.1|  487|Caenorhabditis elegans
           UDP-GlcNAc:a-6-D-mannoside
           b1,2-N-acetylglucosaminyltransferase II protein.
          Length = 487

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 230 LGRLGSHPRMCS*HTTGLRQNRSISVRIATCTEL 129
           +  LG HP   S H  G+   ++ S +I  C+E+
Sbjct: 313 IAHLGVHPWYSSKHNMGMALQKNTSQKIKGCSEM 346


>U41552-6|AAU05561.1| 1203|Caenorhabditis elegans Hypothetical
           protein K07E3.7b protein.
          Length = 1203

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 35  PHSALTKKQKNNPKCNTITNFKYKMNIFRGLVILY 139
           P + + K++K+NPK  T +  + K+NI      LY
Sbjct: 25  PSTKIMKREKDNPKAKTTSFNQGKLNIGEETCDLY 59


>AF025458-3|AAB70976.1|  612|Caenorhabditis elegans Hypothetical
           protein C01B12.3 protein.
          Length = 612

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 14/59 (23%), Positives = 29/59 (49%)
 Frame = +2

Query: 44  ALTKKQKNNPKCNTITNFKYKMNIFRGLVILYMSLFVLIYFGFVGALLYVRSTFSDDFQ 220
           AL  +Q  +P+ N + +FK  ++++  ++ L   +F + +      LL       DDF+
Sbjct: 251 ALFGRQYLHPESNRLNDFKQTIDLYVPIMSLLQFIFFIGWMKVAEVLLNPLGEDDDDFE 309


>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical protein
            C34B4.1b protein.
          Length = 1099

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 179  ALLYVRSTFSDDFQVFQDETYT*VKQRFLKYHFILIKCKK 298
            A LY +  F D  Q   D+ +  + QRF     + + C K
Sbjct: 917  AALYAQMVFGDANQSLSDQQFEFISQRFYPSKMLDVACIK 956


>Z78059-4|CAB01487.2|  995|Caenorhabditis elegans Hypothetical
           protein C34B4.1a protein.
          Length = 995

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 179 ALLYVRSTFSDDFQVFQDETYT*VKQRFLKYHFILIKCKK 298
           A LY +  F D  Q   D+ +  + QRF     + + C K
Sbjct: 813 AALYAQMVFGDANQSLSDQQFEFISQRFYPSKMLDVACIK 852


>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
          Length = 1045

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 179 ALLYVRSTFSDDFQVFQDETYT*VKQRFLKYHFILIKCKK 298
           A LY +  F D  Q   D+ +  + QRF     + + C K
Sbjct: 863 AALYAQMVFGDANQSLSDQQFEFISQRFYPSKMLDVACIK 902


>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
          Length = 1099

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 179  ALLYVRSTFSDDFQVFQDETYT*VKQRFLKYHFILIKCKK 298
            A LY +  F D  Q   D+ +  + QRF     + + C K
Sbjct: 917  AALYAQMVFGDANQSLSDQQFEFISQRFYPSKMLDVACIK 956


>AF047659-11|AAC04428.1|  182|Caenorhabditis elegans Hypothetical
           protein K07H8.3 protein.
          Length = 182

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -1

Query: 279 IKWYFKKRCFTHVYVSSWKTWKSSENVLLTYNRAPTKPKYISTNSDMYRITRPL 118
           ++ Y  K    HV VS+       +N L  +    T+PKY +   D Y + R L
Sbjct: 99  VETYNAKYVSLHVRVSNRAALNLYKNTL-KFEIVDTEPKYYADGEDAYAMRRDL 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,306,509
Number of Sequences: 27780
Number of extensions: 171987
Number of successful extensions: 562
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)